| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000489 |
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| Symbol | |
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| ID | 8558795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 585528 |
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| End bp | 587819 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646408155 |
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| Product | sensory box/GGDEF family protein |
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| Protein accession | YP_003287642 |
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| Protein GI | 262395789 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAGGT TAAAGAAGAA CATTTGGACA CTATACATGG CGCTACTTAC GATAAGTGCC
GTGCTGTTCG TGTTGTTTGG CCGCTACCAT TATGAGTCAA CCCTGAATAA GTACAAAGAT
AAGCAGCTCC TACAATTGGA GCTGTTTGCC TCTTCTGTCG AATCACTTCT GAAAGGACAA
GAATCGTTAC TTGAAGTCAT TGGTCATCAG TTGGTCGAGA GAAATGACTT TACTCGTACA
GCAGCAGTTC AAACTCGCCC GATGCTGGAC AAACTACTCA GTATCCATCC GGCGATTATT
GGGTTCGGCC TAACTAACCC CGATGGAGAC TACATCGCCG TAAGCTCCAA TTTGATCTTG
GCAAAGCTGC ATAATCTAAA ACAAGATCCA CTGACTCGTG ATACCTTTTT GGCAGCGCTC
AACTCCGACC GAATGATTAT AGGTCGAACG TATTTTATGC CAGCTCAAGA TTCACTTGTA
ATTCCGATCC GAAAAGCAAT TCCAAATAAA GATGGTGTTG TACAAGCAGT GATGACAGCT
GGCTTTAATA TGAATTCATC TTCGGTTTTT CGTAACGACA TCCATGCTAA TGAGCACAAT
CGGGTCACAT TGATCCGCAG TGATGGCTAC CTTACTTTTA GCTCGTCAGA AGATACAACC
CTAGAAGATT ACCTAAAACC TGCCAATGAT TTAGATATAA AAGCCGTTAT GGCTCAAATA
ACAAAAGATT CAGGCTGGGA TATGGCGCAA CTAAAAGAGC TCACACGAGC GCTCAATATT
GTTGTCGACA ATTCTCGCCT GAGTGAGTTA ATCACATTGA GATACCTTCC TGATTATCAT
CTTTGGGCCT CTTCCTCGAC AGATTTGAAT TTTATTAAGC GCGGATTTTA CGAACAGTTT
GCACTGTACT CGATTGTTTT TCTTATCGTC CAAGGTGCTT TTTACGCTTT ATTCCGCTCC
ATTGCGAACA ATGAACATAA AACAAAACTG CGTTTGCTCT ATCAAGCGAA CCACGATCAT
CTCACTGGAT TACCAAACCG AGAGTACCTA CGCGCAAACA TTCGACATTG GCTTTCAGGG
AAAGGGAATC CTTTTTCTTT GATGTTTATC GATATTGATA ATTTCAAATC AGTCAACGAC
ACACATGGTC ATGACTTTGG CGACGAAGTT CTAAAACAAA TATCTATCCG CTTAAACACC
TTTGTTAACG ATGGCCGATT AATCATCCGT GAAGCCAGTG ACGAGTTTAT TTTTCTAACA
AATCGAATTG ATGAAGTAAG CGTTAAAAGA CTAGCGAGCG ACTTAATAAA GGCGCTATCA
GAACCCTACG AAGTCAATGA CAGTCAGTTT CTGCTCAGTT GCAGTATTGG TATTGCCTGC
TATCCACACC ATGGTGAAAC ATTAGATGAA CTGCTCCTGT CAGCCGATAT TGCGATGTAT
CAAGCGAAAA AACAACGCAA CGTATACAGC CTGTTCAATC AACAGATGCA AGCTACACAT
CTGCGTAAAA TGAAAATTGA GCAACGCCTG AGGCTCGCGA TAGATAAGCA AGCGCTTCAT
ATGGTTTATC AACCTCAGTT AAACCTAGAA GGCGATATCT ATGGTGTCGA AGCGCTTATT
CGTTGGAGTG ATGATGAGCT CGGCTTAGTC CCACCAAGTG AATTTATTCC CGTCGCAGAA
AGCACTGGGT TGATGGTTCG TATTGGTGAA CAAATCATTG AAAATAGCCT GACAGATATG
GCTAAACTGA CTGGTAATAT TGATACATCT ATCCAGATAT CTATTAACAT CTCGGTCAAA
CAGTTTGTTC ACGCCAAATT CATTACTAAT CTTATGAATG CTATTGAGAA ACGCGGCATC
GAATGTTCAA AGATTACCCT AGAGATCACC GAAAACCTGT TTATTGAAGA TCTTGAAAAG
TTCGCACCAA TTTGCGAGCG CTTGCATGCT CTTGGCTTTA AAATCTCGCT CGATGATTTC
GGGACTGGCT ACTCTTCATT AAGCATGTTG CGTACGCTAC CTATTGACGA GGTGAAGATT
GACAAGAGCT TTGTCGATCA CATTGAGCAT GACAAAAAAG CGCTGAATAT GGTTAAGAAT
ATCATTTCTA TCGGCAAAAA CTTTGAAATG AAAGTACTAG CTGAAGGAGT AGAGACGCTG
CAACAACTGA ATGAGTTAAA AGCTTGCGGT TGTGATTTGA TTCAGGGCTA CTTCTACTCT
AAACCTTTAT CGCTTGAAGA CTTGATCGCT TTTACGAAGC AGAACCAAAG CAAAGAAACC
GTAGTTGAAT AA
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| Protein sequence | MVRLKKNIWT LYMALLTISA VLFVLFGRYH YESTLNKYKD KQLLQLELFA SSVESLLKGQ
ESLLEVIGHQ LVERNDFTRT AAVQTRPMLD KLLSIHPAII GFGLTNPDGD YIAVSSNLIL
AKLHNLKQDP LTRDTFLAAL NSDRMIIGRT YFMPAQDSLV IPIRKAIPNK DGVVQAVMTA
GFNMNSSSVF RNDIHANEHN RVTLIRSDGY LTFSSSEDTT LEDYLKPAND LDIKAVMAQI
TKDSGWDMAQ LKELTRALNI VVDNSRLSEL ITLRYLPDYH LWASSSTDLN FIKRGFYEQF
ALYSIVFLIV QGAFYALFRS IANNEHKTKL RLLYQANHDH LTGLPNREYL RANIRHWLSG
KGNPFSLMFI DIDNFKSVND THGHDFGDEV LKQISIRLNT FVNDGRLIIR EASDEFIFLT
NRIDEVSVKR LASDLIKALS EPYEVNDSQF LLSCSIGIAC YPHHGETLDE LLLSADIAMY
QAKKQRNVYS LFNQQMQATH LRKMKIEQRL RLAIDKQALH MVYQPQLNLE GDIYGVEALI
RWSDDELGLV PPSEFIPVAE STGLMVRIGE QIIENSLTDM AKLTGNIDTS IQISINISVK
QFVHAKFITN LMNAIEKRGI ECSKITLEIT ENLFIEDLEK FAPICERLHA LGFKISLDDF
GTGYSSLSML RTLPIDEVKI DKSFVDHIEH DKKALNMVKN IISIGKNFEM KVLAEGVETL
QQLNELKACG CDLIQGYFYS KPLSLEDLIA FTKQNQSKET VVE
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