Gene VEA_000472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000472 
Symbol 
ID8558778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp568424 
End bp569965 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content47% 
IMG OID646408138 
ProductYjeF protein 
Protein accessionYP_003287625 
Protein GI262395772 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTTA ATCTCGCCCT AAAACTCTAC ACCGCAGAAC AAGTAAAAAA CGGTGAAACG 
CTGGCAGCGC AAATGGCTGG TGTTTCTATG TATAGCCTAA TGCAACGCGC AGGTATGGCT
GTGTATGAGC GTTTTTTACA CTTATATCCC AAATCAAAAA ATATCTTAGT CATTTGTGGC
AAAGGGAATA ATGGTGGTGA CGGATACGTA TTTGCCTCGC TTGCTAAACA AGCGCAACTC
AATGTACAGG TTTTCCAACT TGGTGATGTG ACTGCGCTCA AAGGTGATGC TTTACGCGCA
TATCAAGATT GGCAGTCCAT CGATGGTGTT AACAATGATT GGGATGAGTG GAATACCGCA
TTGCTAGAAG CCGATGTGAT CATTGATGCC ATGTTAGGCA CTGGTCTAAG TGGTGAGGTT
CGTTCGGAGT ACCGTCGCTA CATTGAGCAA ATCAATCAAA TTCACACCCC AGTGATTGCA
GTCGATATTC CTTCCGGGTT GTGTGCAAAT ACAGGTGCTA TTTTAGGCGA TGCCATTCAT
GCTGAGCATA CTGTAACCTT CATTGGTGTT AAGCAAGGCT TGTGCACCGG ACAAGCGAGA
GATCGAGTTG GTGAACTCCA CTTTTGTGGG TTGGGTGTAA ATGTTGAGTT TGCTTCTATC
GAAGTAGAAA GTGCACTAGG TATTGATCAT CAGGTTGTTT CAAGGTTAAT GCCCAAGCCA
AACCCGACAG CACACAAAGG TGACAATGGC AAACTACTTT GTGTCGGTGG TAACCAAGGT
ATGTCAGGAG CGATTCGTTT ATGCTCCTCC GCAGCGGTTA GATCCGGAGC GGGTTTAACT
GCCGCAATTA CTCACCCGAG TAGCCTTGTT CCGCTACAGA TTGGCTGCCC AGAAGTAATG
AGCCAAAGCA TCACCGCCGA CTTACTCAGG GATACTGAGA ATGACTTAAC CAAACGCATT
CGCTGGGCTG AAGTATTGGT GTTTGGTCCA GGTTTTGGTG ATGATGAGTG GGCTTATCAA
GCCTATCAAT ATCTGGCTCA AGAACAGAAA CCTAAAGTTG TTGATGCTGA TGGGCTCAAT
ATTCTAGCGA TGCTAAGCCA ACGATGTGAT GGCACTTTGG TGTGCGACAA CCAGCGAGTG
ATCACGCCGC ATCCTGGAGA GGCAGCTCGA CTATTAAATG TGACCACTCA ACAAATAGAA
AATGACCGAT ATTCTGCTGC AAGACAACTG CAAGAGCGTT ATGGCGGTGT GGTGGTTTTA
AAAGGTGCGG GAACGCTTAT TTACGATGGA ACGAGAATGT ACGTCTGCCT AGCGGGTAAC
GCCGGAATGG CGACGGGCGG AATGGGAGAT GTGCTATCTG GTGTTATTGG TGCGTTGCTA
GCTAAAGGGT TACCCATTTC CGTTGCGGCA CGTTTAGGTG TGGTACTCCA CAGTCATGCT
GCGGATATAA ACGTGAGTCA GCATGGTCAA GTTGGTCTTT TGGCAAGTGA TGTTATAGGC
ACACTTCGTA CCGCTATTAC TCAACAAATC GATAGGACGT AG
 
Protein sequence
MDFNLALKLY TAEQVKNGET LAAQMAGVSM YSLMQRAGMA VYERFLHLYP KSKNILVICG 
KGNNGGDGYV FASLAKQAQL NVQVFQLGDV TALKGDALRA YQDWQSIDGV NNDWDEWNTA
LLEADVIIDA MLGTGLSGEV RSEYRRYIEQ INQIHTPVIA VDIPSGLCAN TGAILGDAIH
AEHTVTFIGV KQGLCTGQAR DRVGELHFCG LGVNVEFASI EVESALGIDH QVVSRLMPKP
NPTAHKGDNG KLLCVGGNQG MSGAIRLCSS AAVRSGAGLT AAITHPSSLV PLQIGCPEVM
SQSITADLLR DTENDLTKRI RWAEVLVFGP GFGDDEWAYQ AYQYLAQEQK PKVVDADGLN
ILAMLSQRCD GTLVCDNQRV ITPHPGEAAR LLNVTTQQIE NDRYSAARQL QERYGGVVVL
KGAGTLIYDG TRMYVCLAGN AGMATGGMGD VLSGVIGALL AKGLPISVAA RLGVVLHSHA
ADINVSQHGQ VGLLASDVIG TLRTAITQQI DRT