| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000451 |
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| Symbol | |
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| ID | 8558757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 517317 |
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| End bp | 518948 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408117 |
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| Product | transcriptional regulator |
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| Protein accession | YP_003287604 |
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| Protein GI | 262395751 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.219758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCAG CTAACCATAG CGAACTTAGC AACGCCCTAC TTGCGATCAG TCAGTCTTTG
GCTGATCGCA GCCAGCTTAC CCAAACCTTG GATGCTGTGT TGACCGCTGC GAGACAAATG
ACCCTCGCAA AGCACGGCAT CATTTATGTT TTGGACCAGA CTGGGCAGGC GTTGATTCCA
AGTACCGCTC ACCATAACGA TAAAACAATC GTTTCCCACC CTTGGGAAGC ATTGCAGTTA
GACTCAGCCA GTGAAAACGA CCCATTTAAC TTTGCCATTC GTAATGGTGA AGTGGTGTTG
ATTAACGAGT TGTATAAGTA CAACGGCTAT GACTGCGAAA GCATCTATCA AACTGAGCAG
ACACTGGGAT TAAAAAGCGA GAACTTACTG GCTTGGCCTT TGATTGATAG CGAAAGCAAA
ACCATTGGGC TGTTAGTCTT ACTCGATTTG AACGTCATCG ACAACGAGGC AGCCTTGACG
GAGTTTTGTC GAATGGCCGC GAGTAATATT CGCCAAGCTG TGTGGTTAGA GCAATACGGG
CAAGTAATAA AAAATCTCAA TGCCGACAAT CAAGCCCTAG TACGCGAGAA CACTCAGCTC
AAAAAACGTA CTCAGAAAGC CTATCAAGGT CCTATTGCAG AGAGCGAAGA AATGCTCAAT
GTCTTGAATC GTCTTGATAA GGTGCTATCT CTTCCTGTCG ACGTTCTGTT GCGTGGTGAA
ACGGGCGCTG GTAAAGAGGT GATCGCGAAA TACATTCACG AAAACTCTAA TCGTTCAGAA
CAACCTTTGA TCGTACAGAA CTGTGCCGCA ATCCCAGAGC AGTTATTAGA GTCAGAACTC
TTTGGCCATA AGAAAGGCTC ATTCACTGGC GCGGACAAAG ACAAAGTCGG TTTGTTTGAA
GCAGCCAACG GCGGTACGCT TTTCTTGGAT GAGATTGGCG ATATGCCAAT GCTACTGCAG
GCAAAATTGC TGCGTGTGCT ACAAGAACGT AAAGTTCGCC CTATCGGTAC CAGCAAAGAG
ATTGAAGTGG ACGTTCGCGT TATCGCCGCA ACCCACTGTA ATCTTATGCA GCAAATTAGA
GATGGCGGAT TTCGTGCCGA CTTGTTCTAT CGCTTGAATG TGTTCCCTAT TACATTACCA
CCACTGAGAG CACGCAAGTC GGATATTATT CCCCTTGCTG AACATTTCGT GCAACACACA
ACCAACACGC TAGGCTTGCC GCAAGCGCCA GGGTTAAGTG CCAACGTACG TAAACAGCTT
CTTGCCTATC AATACCCAGG TAACGTGCGT GAGCTTAAGA ACATCATTGA GCGCTCGGTG
CTACTGTCCG ATTTTGAAAC CATTACTCAC ATTGAGTTTG GCGAACAAAT CCCAGAAAGT
GTGCCAAGTA TCGACATGAA AGCAGCTTCA CCTACCCCAG AGCAACCTGC TTACGAGCAG
CAGGCACAAG CGGATTTAGA AGACGTTTCA AAGAGTCTTA AGGACGTCGT TAGCCAATAC
GAGCGTACAG TGATCATCGA TTGCTTAAAT GCCTGCAATT GGCACACCAA GAAGGCCGCT
GAGCAATTGG CACTTCCAAT GAGCACTCTC AACCATAAGA TGAAGAAATA CGACATTTCT
GCAGCTGGTT AA
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| Protein sequence | MRSANHSELS NALLAISQSL ADRSQLTQTL DAVLTAARQM TLAKHGIIYV LDQTGQALIP
STAHHNDKTI VSHPWEALQL DSASENDPFN FAIRNGEVVL INELYKYNGY DCESIYQTEQ
TLGLKSENLL AWPLIDSESK TIGLLVLLDL NVIDNEAALT EFCRMAASNI RQAVWLEQYG
QVIKNLNADN QALVRENTQL KKRTQKAYQG PIAESEEMLN VLNRLDKVLS LPVDVLLRGE
TGAGKEVIAK YIHENSNRSE QPLIVQNCAA IPEQLLESEL FGHKKGSFTG ADKDKVGLFE
AANGGTLFLD EIGDMPMLLQ AKLLRVLQER KVRPIGTSKE IEVDVRVIAA THCNLMQQIR
DGGFRADLFY RLNVFPITLP PLRARKSDII PLAEHFVQHT TNTLGLPQAP GLSANVRKQL
LAYQYPGNVR ELKNIIERSV LLSDFETITH IEFGEQIPES VPSIDMKAAS PTPEQPAYEQ
QAQADLEDVS KSLKDVVSQY ERTVIIDCLN ACNWHTKKAA EQLALPMSTL NHKMKKYDIS
AAG
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