Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000442 |
Symbol | |
ID | 8558748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 503907 |
End bp | 505475 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646408108 |
Product | uncharacterized protein ImpA |
Protein accession | YP_003287595 |
Protein GI | 262395742 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.859338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCCAACA TTGATACTGA TCACCTTCTT AAACCGATTT CTGATGAATC TCCTGCGGGT AACGATGCTC GTTACGAGTT TTGCTATGAA ATGATGGAAG CCGAGGTAAA AAAGTTCGGC TCACTATTTG GCGAAACGGT CGACTGGAAT GTAGTAAAAA CCAATGCGAT GGAAGTGCTC GAGCATCATA GTAAAGATTT AAAAGCACTT TGCTATTTAG TACGAGCGCT TGCAGAGGAA TCCGGGCTCA AAGGTTTTGA ACAAGGTCTG AAACTGCTTA ATGAGGCGTT AGCTTGCTTC GGTAGTGATC TTTACCCGTC ACGGAAACGC GGTAGAGACG GTGCGGTGGA GTGGTTGAAT CATCAATTTA AATTGATGAG CACTAAACTT GCGGACAGTG CGCAATCTTG GGAATTAGTT TCAGGTTGCA TTTCGACTAT TGAAGAAGTG CAGCGTCAGT ACGACGATGT TTACCAAGAT TCCGAAGCTG ACTTCTTTGA GATTCGCACG CAGCTCAATG TTTTATCTCA ACAAGCAGCT GCCGATGACC AGAGCGATGA CGCAATAGCT ACCATCGAAC AAGCGGCACC AGCTACGCAG CCTGCCGCGG TAGAAACGCC AGCACAGAAC GACGTTCAAA CCGCTTCAGC GAAGACGGTT CCGCCGACGC CTAAACCTGC GCCAGTTAAG AAAGCCGTAG CAAAAGAAGT CGATGTCGAT ACAGATTTCT CGTCGCCTAC GGCTTCAAAA CGCACGTTAA AAAAAGTCGC GGAAGTCATG CTTCATGCGA ATCCAAGTGA TCCGCTGGCT TACCGAATTT ATCGTCATCT GACTTGGGAT GACATTGATG GTCTACCTGA CCACCAAAAC GATCAAACGC CATTGAGCTT GGCGGTATCG TCCGATCAGC AAGCGGAATA CCGCGACAAA GCCAATCAGG AAAGTGACAT CGACACGATT AAACGTTTGG AGCGCACGCT AACTGACGCG CCATTTTGGC TCACAGGCCA CCATTTCGTG TATTTGATGC TTACTAACTT AGGTTTTGAT GACGCAGCAC TTGCCGTGAA ACAAGAAGTA AAGCGGTTTG TTGAGTCATT GGAGGGCATC GAACGCCTCT CTTTTAAGAA TTCTATACCA TTTGCAGATG AAGCAACATT GAGTTGGTTG TCTACTCAAG ATGCTACTTC ATCGGCAGCA CAAACTGTTG TACAGACGGT TGTGATCGCT GAAGAAGATT CATTGCTGGT GGAGGATATC ACTCTAGAAA ATCTAGGGGA ATATGCCGCA GAACTTGCCC GCAAGCTTGA GCTGGATGGC TCAGGGCGTG GACAGTTCAT GCTGTATTTA CAATTGATAG CAGCTTACCA GTCTGTTGGA TTATACCCGT TGTGTTTGCC GTATCTTGAG AAGGGGTGGG AAGTACAAAA TGCGTTTAAT CTCGCGAGCT GGGAACCCCA CTTATCGTCG CAGTTAGAAG ACCTGATTCG AAAAACACTC CATCAGTTAT TCAGAAGTAA GGATCTTTTA CCTGAGAAGT ATGAAGAGTG GAAAGCAATT TATGACTAA
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Protein sequence | MSNIDTDHLL KPISDESPAG NDARYEFCYE MMEAEVKKFG SLFGETVDWN VVKTNAMEVL EHHSKDLKAL CYLVRALAEE SGLKGFEQGL KLLNEALACF GSDLYPSRKR GRDGAVEWLN HQFKLMSTKL ADSAQSWELV SGCISTIEEV QRQYDDVYQD SEADFFEIRT QLNVLSQQAA ADDQSDDAIA TIEQAAPATQ PAAVETPAQN DVQTASAKTV PPTPKPAPVK KAVAKEVDVD TDFSSPTASK RTLKKVAEVM LHANPSDPLA YRIYRHLTWD DIDGLPDHQN DQTPLSLAVS SDQQAEYRDK ANQESDIDTI KRLERTLTDA PFWLTGHHFV YLMLTNLGFD DAALAVKQEV KRFVESLEGI ERLSFKNSIP FADEATLSWL STQDATSSAA QTVVQTVVIA EEDSLLVEDI TLENLGEYAA ELARKLELDG SGRGQFMLYL QLIAAYQSVG LYPLCLPYLE KGWEVQNAFN LASWEPHLSS QLEDLIRKTL HQLFRSKDLL PEKYEEWKAI YD
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