Gene VEA_000441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000441 
Symbol 
ID8558747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp503374 
End bp503880 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content47% 
IMG OID646408107 
Productuncharacterized protein ImpB 
Protein accessionYP_003287594 
Protein GI262395741 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGTG ACGGCTCGGT GGCTCCTAAA GAGCGAATTA ATATCCGTTA TGTTCCAGCA 
ACTGGCGATA CGCAAGAAGA CGTAGAACTG CCGCTAAGCA TGATGGTGGT TGGCGACTTT
ACTGCACGTG CAGATGAGAC GCCAATTGAA GAACGCACTC CAATCAATAT CGATAAAGAC
AACTTTAACG AAGTGCTAGA AGGCATGTCT CCAAACGTTA AAGTGAACGT TGAAAACCGT
CTTTCTGATG AAGAAGGCGG CCAAATCGGT GTTGATCTAA CGTTCCAAAA CATGAAGGAC
TTCTCTCCAG AAGCGATTGC GAAAAGCGTG CCTGAACTAA ACAGCCTGCT TGAACTTCGC
GAAGCCTTGG TGGCGCTGAA AGGCCCTCTA GGTAATGTTC CTGCATTCCG CAAGAAGATC
GCATCGGTTC TTCAAGATGA AGACGCGAGA AAGAAACTGT TGGATGAACT AAGCATTGGT
AACGACCAAG AAGCAAAAGA AGAGTAA
 
Protein sequence
MSRDGSVAPK ERINIRYVPA TGDTQEDVEL PLSMMVVGDF TARADETPIE ERTPINIDKD 
NFNEVLEGMS PNVKVNVENR LSDEEGGQIG VDLTFQNMKD FSPEAIAKSV PELNSLLELR
EALVALKGPL GNVPAFRKKI ASVLQDEDAR KKLLDELSIG NDQEAKEE