| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000440 |
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| Symbol | |
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| ID | 8558746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 501890 |
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| End bp | 503365 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646408106 |
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| Product | uncharacterized protein ImpC |
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| Protein accession | YP_003287593 |
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| Protein GI | 262395740 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.338672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCAG AAGCACAAGC GCCAGAACAA GAAGCAGCCT TAGTTGAATC AGGCTCACTT
CTGGATAGCA TTCTTAACGA AACTCGTTTA AAGCCAAGTG ATGAAGGTTT TGATGTTGCA
AAACGCGGCG TAGAAGCATT CATCAGTGAG CTACTAAGCA GCTCGAACAC AGAGAAAGTG
GATCAGTCTT TAGTTGATCT GATGATCTCA GAAATTGACC AAAAACTGTC TAAGCAAGTT
GATGCAATTC TTCACAACGA AGAAGTTCAA GCGATTGAAT CAACTTGGCG TGGCCTTAAG
TACCTGGTTG ACCACACTGA CTTCCGTGAG AACATTCAAA TTGAATTGAT CTCTGCAAAG
AAAGATGAAG TTCTTGATGA CTTCGAAGAC GCGCCAGAAG TGGTGAAGTC TGGTTTGTAC
AAACAAATCT ATACGCGTGA ATATGGCCAA TTTGGTGGTA AACCTGTTGG CGCAGTCATT
TGTGACTACG ATATGTCGGC TTCGTCTCCA GACATCAAAC TGATGGAGTA CATGGCAAAC
GTGGGTGCAA TGTCTCATGC TCCATTTATT ACATCTGCGT CTGCGAAGTT CTTTGGTTTA
GATAGCTATG AAGAGCTACC GAATCTAAAA GATCTTAAGT CAGTATTTGA AGGCCCACAA
TACACTAAAT GGCGTAGTCT ACGTGAACAC GAAGATGCAC GTTACCTAGG TCTATGTACG
TCTCGCTTTA TGCTACGTAC ACCTTACTCT GTAGAAGATA ACCCAATTAA GGCGTTTGAC
TACGATGAGC AAGTAACAGA CAGCCATGAC AACTACCTAT GGGGTAACTC TGCGTACGCG
ATGGCATCAA AAATTAGTGA GTCTTTCGCT AAGTACCGTT GGTGTCCAAA CATCATTGGT
CCTCAAAGCG GTGGTACTGT GCATGACTTA CCGGTTTACA ACTTTGAAGC CATGGGTCAA
ATCGAAACTA AGATCCCAAC TGAGATTCTT GTTTCTGACC GTCGCGAGTA CGAGCTAGCA
GAAGAAGGCT TCATTGCGCT AACCATGCGT AAAGGTTCTG ACAACGCGGC GTTCTTCTCT
GCAAACTCTG TTCAAAAACC GAAAGTGTTT GCGAACACGC CAGAAGGCAA ACAAGCAGAG
ATGAACTACA AGCTAGGTAC TCAGCTTCCT TACATGTTCA TCATCAACCG TCTAGCACAC
TACATAAAAG TGCTACAGCG TGAGCAAATC GGTTCGTGGA AAGAGCGTTC AGACCTAGAA
ATTGAACTGA ACAAGTGGAT TCGTCAATAC GTTTCTGACC AGGAAAACCC GCCAGCAGAA
GTCCGTGGTC GTCGTCCACT ACGTGCTGCT AAGGTTGAAG TATCAGACGT AGAAGGTGAC
CCAGGTTGGT ACAAAGTATC AATGTCTGTA CGTCCTCACT TCAAGTACAT GGGTGCAAGC
TTCGACTTGT CTCTAGTTGG TAAGTTAGAC CAATAA
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| Protein sequence | MSAEAQAPEQ EAALVESGSL LDSILNETRL KPSDEGFDVA KRGVEAFISE LLSSSNTEKV
DQSLVDLMIS EIDQKLSKQV DAILHNEEVQ AIESTWRGLK YLVDHTDFRE NIQIELISAK
KDEVLDDFED APEVVKSGLY KQIYTREYGQ FGGKPVGAVI CDYDMSASSP DIKLMEYMAN
VGAMSHAPFI TSASAKFFGL DSYEELPNLK DLKSVFEGPQ YTKWRSLREH EDARYLGLCT
SRFMLRTPYS VEDNPIKAFD YDEQVTDSHD NYLWGNSAYA MASKISESFA KYRWCPNIIG
PQSGGTVHDL PVYNFEAMGQ IETKIPTEIL VSDRREYELA EEGFIALTMR KGSDNAAFFS
ANSVQKPKVF ANTPEGKQAE MNYKLGTQLP YMFIINRLAH YIKVLQREQI GSWKERSDLE
IELNKWIRQY VSDQENPPAE VRGRRPLRAA KVEVSDVEGD PGWYKVSMSV RPHFKYMGAS
FDLSLVGKLD Q
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