Gene VEA_000438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000438 
Symbol 
ID8558744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp499659 
End bp501407 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content45% 
IMG OID646408104 
Productprotein ImpG/VasA 
Protein accessionYP_003287591 
Protein GI262395738 
COG category[S] Function unknown 
COG ID[COG3519] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03359] type VI secretion protein, VC_A0110 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.877491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTAACA GTAAATACTT TCAAGATGAA CTCACGTATT TGCGTGAGTC GGGTAGTGAG 
TTTGCCAAAT ATCATCCGAA GTTAACTCAC TTTCTCTCTG AGGGAACCTT TGACCCAGAT
GTCGAACGAC TGCTCGAAGG TTTTGCCTTT CTGACAGGTA GAATCCGCGA GAAGATTGAT
GATGAACTGC CTGAGCTGAC GCAATCTCTG ATGACTTTGC TGTGGCCACA TTACATGCGT
TCGATTCCGT CTTTGTGCAT TAGCGAACTA AAGCCGCATA CCGGAAGTGT TACTGAGAAA
ACCGTGGTGA AACGTGGCGC AGAAATGGCG AGTGAACAGG TAGAGGGCAC GCAATGTTTG
TTCCGTACTT GTTACGACGT CAATCTATAC CCAATTACGA TCACTAACAT CGAACAGACC
AACAGCCGCA CCAGTTCGAT GATTGATGTG ACTTTATCGA CGGAGCATGG TCTTGAACTG
TCTCGGATCG GTTTAGACAC GCTGCGATTA CACTTGCATG GCGAGATTCA TATTACTCGA
ACTGTCTTCT TATGGCTGTT CCGTTACCTA GATTATGTCG AATTAGATGT TGGTGGTGGT
TACAAACATC GCTTAGGGCC AGAATATGTT AAGCCAGTTG GGCATGAAGA GGACGAAGCG
CTCCTGCCTT ACAGCAAAAA TTCATTTGCA GGCTACCGTT TGCTGCAAGA ATTCTTCTCT
TTGCCAGATA AGTTCATGTT CTTCGACATT AAAGGCTTAG AGTGGCTAAA AGGCATTCCA
CAACGTAGCA CGGTCAAAAT CAAATTCCAC TTTAAGCGTG CATTACCGTC AGAAGTGGTG
CTTAAAGATA AACACTTGAA GTTGCACTGT ACGCCTGCCG TTAATTTATT TGAAAAAGAT
GGCGATCCAA TTCGTTTAGA GCACCGACGT AACGAGTACA AGGTACGCCC GCAAAGCAAC
ACTCAGGAGC ATTACGAAGT CTATTCCATT GAGCAAGTGG AAAGCTGGAG TAAAGACGAG
CGTCGTCGAA AGTCTCTGAT TGAATTTGAA TCATTTGAGC ATCAAATTAA CCAACGAGAT
AAGCGCGAGT TCTACAAATC TAAAGTCGCT GAGCGTGTAA GCGGTAGAGG CCTTGAACGC
TACATATCAT TTCATACTCA TAATGGGGAC ATTGCGGAAC TGGGAACAGA AACTGTACTC
ATGAAACTGC AATGTAGTAA CGCAGATTTG GCGGAACGTT TGTCAGTGGG GGACATCACT
TACGCGACTC ATAAATCACC GACCTATGCG ACGTTTAGGA ATATTACCAA GCCCACTCAA
TCGGTCAGTC CGCAAGTGAA TGGTGAGCTT CAGTGGCAGT TAATTGCGAA TATGTCACTC
AACTACTTAT CGCTGGCAAA TATTGATGTA CTTAAAGTGC TTCTCTCTAC CTATGATTTC
CACTCTCGTG TTGATAGACA AGCGCACCGC GCATCCATTC ATCGACTTGA TGGGGTTATC
TCTTCGGAAA TGAAACCAAT CGACCGTGTG TTTCGTGGCG TTTCGGTACG CGGCAATCAG
TTTAAGTTGG TCACCAATTC CAAATTTTTT GTCAATGAAG GCGACATGTT CTTGATGGCG
ACGGTGCTTA ACGAATTCAT CCGTTTGTAC TCGAGTGTGA ACTCCTTTAC CGAACTGGAA
GTGTTTGATG AAGCGACAGG CGAGGTTTAT AACTGGGCAA GTCTTATCGG ACAGCAGACG
ATACTATGA
 
Protein sequence
MSNSKYFQDE LTYLRESGSE FAKYHPKLTH FLSEGTFDPD VERLLEGFAF LTGRIREKID 
DELPELTQSL MTLLWPHYMR SIPSLCISEL KPHTGSVTEK TVVKRGAEMA SEQVEGTQCL
FRTCYDVNLY PITITNIEQT NSRTSSMIDV TLSTEHGLEL SRIGLDTLRL HLHGEIHITR
TVFLWLFRYL DYVELDVGGG YKHRLGPEYV KPVGHEEDEA LLPYSKNSFA GYRLLQEFFS
LPDKFMFFDI KGLEWLKGIP QRSTVKIKFH FKRALPSEVV LKDKHLKLHC TPAVNLFEKD
GDPIRLEHRR NEYKVRPQSN TQEHYEVYSI EQVESWSKDE RRRKSLIEFE SFEHQINQRD
KREFYKSKVA ERVSGRGLER YISFHTHNGD IAELGTETVL MKLQCSNADL AERLSVGDIT
YATHKSPTYA TFRNITKPTQ SVSPQVNGEL QWQLIANMSL NYLSLANIDV LKVLLSTYDF
HSRVDRQAHR ASIHRLDGVI SSEMKPIDRV FRGVSVRGNQ FKLVTNSKFF VNEGDMFLMA
TVLNEFIRLY SSVNSFTELE VFDEATGEVY NWASLIGQQT IL