Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000438 |
Symbol | |
ID | 8558744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 499659 |
End bp | 501407 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646408104 |
Product | protein ImpG/VasA |
Protein accession | YP_003287591 |
Protein GI | 262395738 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.877491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTAACA GTAAATACTT TCAAGATGAA CTCACGTATT TGCGTGAGTC GGGTAGTGAG TTTGCCAAAT ATCATCCGAA GTTAACTCAC TTTCTCTCTG AGGGAACCTT TGACCCAGAT GTCGAACGAC TGCTCGAAGG TTTTGCCTTT CTGACAGGTA GAATCCGCGA GAAGATTGAT GATGAACTGC CTGAGCTGAC GCAATCTCTG ATGACTTTGC TGTGGCCACA TTACATGCGT TCGATTCCGT CTTTGTGCAT TAGCGAACTA AAGCCGCATA CCGGAAGTGT TACTGAGAAA ACCGTGGTGA AACGTGGCGC AGAAATGGCG AGTGAACAGG TAGAGGGCAC GCAATGTTTG TTCCGTACTT GTTACGACGT CAATCTATAC CCAATTACGA TCACTAACAT CGAACAGACC AACAGCCGCA CCAGTTCGAT GATTGATGTG ACTTTATCGA CGGAGCATGG TCTTGAACTG TCTCGGATCG GTTTAGACAC GCTGCGATTA CACTTGCATG GCGAGATTCA TATTACTCGA ACTGTCTTCT TATGGCTGTT CCGTTACCTA GATTATGTCG AATTAGATGT TGGTGGTGGT TACAAACATC GCTTAGGGCC AGAATATGTT AAGCCAGTTG GGCATGAAGA GGACGAAGCG CTCCTGCCTT ACAGCAAAAA TTCATTTGCA GGCTACCGTT TGCTGCAAGA ATTCTTCTCT TTGCCAGATA AGTTCATGTT CTTCGACATT AAAGGCTTAG AGTGGCTAAA AGGCATTCCA CAACGTAGCA CGGTCAAAAT CAAATTCCAC TTTAAGCGTG CATTACCGTC AGAAGTGGTG CTTAAAGATA AACACTTGAA GTTGCACTGT ACGCCTGCCG TTAATTTATT TGAAAAAGAT GGCGATCCAA TTCGTTTAGA GCACCGACGT AACGAGTACA AGGTACGCCC GCAAAGCAAC ACTCAGGAGC ATTACGAAGT CTATTCCATT GAGCAAGTGG AAAGCTGGAG TAAAGACGAG CGTCGTCGAA AGTCTCTGAT TGAATTTGAA TCATTTGAGC ATCAAATTAA CCAACGAGAT AAGCGCGAGT TCTACAAATC TAAAGTCGCT GAGCGTGTAA GCGGTAGAGG CCTTGAACGC TACATATCAT TTCATACTCA TAATGGGGAC ATTGCGGAAC TGGGAACAGA AACTGTACTC ATGAAACTGC AATGTAGTAA CGCAGATTTG GCGGAACGTT TGTCAGTGGG GGACATCACT TACGCGACTC ATAAATCACC GACCTATGCG ACGTTTAGGA ATATTACCAA GCCCACTCAA TCGGTCAGTC CGCAAGTGAA TGGTGAGCTT CAGTGGCAGT TAATTGCGAA TATGTCACTC AACTACTTAT CGCTGGCAAA TATTGATGTA CTTAAAGTGC TTCTCTCTAC CTATGATTTC CACTCTCGTG TTGATAGACA AGCGCACCGC GCATCCATTC ATCGACTTGA TGGGGTTATC TCTTCGGAAA TGAAACCAAT CGACCGTGTG TTTCGTGGCG TTTCGGTACG CGGCAATCAG TTTAAGTTGG TCACCAATTC CAAATTTTTT GTCAATGAAG GCGACATGTT CTTGATGGCG ACGGTGCTTA ACGAATTCAT CCGTTTGTAC TCGAGTGTGA ACTCCTTTAC CGAACTGGAA GTGTTTGATG AAGCGACAGG CGAGGTTTAT AACTGGGCAA GTCTTATCGG ACAGCAGACG ATACTATGA
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Protein sequence | MSNSKYFQDE LTYLRESGSE FAKYHPKLTH FLSEGTFDPD VERLLEGFAF LTGRIREKID DELPELTQSL MTLLWPHYMR SIPSLCISEL KPHTGSVTEK TVVKRGAEMA SEQVEGTQCL FRTCYDVNLY PITITNIEQT NSRTSSMIDV TLSTEHGLEL SRIGLDTLRL HLHGEIHITR TVFLWLFRYL DYVELDVGGG YKHRLGPEYV KPVGHEEDEA LLPYSKNSFA GYRLLQEFFS LPDKFMFFDI KGLEWLKGIP QRSTVKIKFH FKRALPSEVV LKDKHLKLHC TPAVNLFEKD GDPIRLEHRR NEYKVRPQSN TQEHYEVYSI EQVESWSKDE RRRKSLIEFE SFEHQINQRD KREFYKSKVA ERVSGRGLER YISFHTHNGD IAELGTETVL MKLQCSNADL AERLSVGDIT YATHKSPTYA TFRNITKPTQ SVSPQVNGEL QWQLIANMSL NYLSLANIDV LKVLLSTYDF HSRVDRQAHR ASIHRLDGVI SSEMKPIDRV FRGVSVRGNQ FKLVTNSKFF VNEGDMFLMA TVLNEFIRLY SSVNSFTELE VFDEATGEVY NWASLIGQQT IL
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