| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000436 |
|---|
| Symbol | |
|---|
| ID | 8558742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 498157 |
|---|
| End bp | 498609 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 646408102 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003287589 |
|---|
| Protein GI | 262395736 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.183617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCAA ACATGACTTT ACAAGGTTTA GATAAATTAG ATCGAAAAAT ACTTTCAAGT
CTATTGTCAA ACGGGCGTGA GTCTATTGCG AATCTATCTC GAAACATTGG TTTGTCTCGT
ACAGCAGTAG CAGAAAGGAT TAATCGTTTA GAAAAGACCG GTATTATCAA AGGCTATACC
GCACAAATTC GTGTAGAAAA CGAAGGGCGC AAAGCCGCAA GCTATCTATT GATATCTTGT
GAAAAGGGTA AGAAAAATGA TGTAACAAAT GCGCTTAAAG AAATCCCTGA GGTTCGCTTA
ACAAGCGTTG TTGGTGGCAA CTTTGATATT ATTGCCCTAA TTGAAGCGCC CGATCTGCAG
TCTATTCATC ATCTTTGTAA CGAAATTGAG TCATTTAACG GGATTCAAAG GCTTGATACT
ACCGTCGTAC TTCACCAGCC GATCAGCCGT TAA
|
|---|
| Protein sequence | MISNMTLQGL DKLDRKILSS LLSNGRESIA NLSRNIGLSR TAVAERINRL EKTGIIKGYT
AQIRVENEGR KAASYLLISC EKGKKNDVTN ALKEIPEVRL TSVVGGNFDI IALIEAPDLQ
SIHHLCNEIE SFNGIQRLDT TVVLHQPISR
|
|---|
| |