Gene VEA_000427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000427 
Symbol 
ID8558733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp484286 
End bp486517 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content40% 
IMG OID646408093 
Producthypothetical protein 
Protein accessionYP_003287580 
Protein GI262395727 
COG category[R] General function prediction only 
COG ID[COG3179] Predicted chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.111385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCAG TTTTTCCGAT AGCGCAACGA GAAGGTGGCG CTTACTACAC GCTCAGTGAT 
TTTACGAAAT TGTTTGATCA AGCTAAGAGC GGTCGTTATT TAATAGGACA AGGGTACGGT
TGGCATAGTG GCATTCACTT AACATCAAAA ATGTTACCGT GGGGGAAAGG GCTCAGACCT
ATTCAAGCGA TGCTTGATGG AAAAATAGTG GCATTTCGCA TAAATCCTGA TTACCTAACA
TCAACGTACC AAGAGCAAGA GTTTAAGTAT AGTAATAACT TTGTGCTTAT CGAGCATGAG
GCTGTAAACC CCGAAGATAA TGAAGATGTA TTTAAGTTCT ATACACTTTA TATGCACCTT
GCGCCACCTT CAGATATTGG CGCCAATTCA TCTATAACCA CGCGTTACCG TTTACAAGAA
GCGAGAAATG TACGCACTTT CAAACATAGT GATGTGCCTA CTAATTCTGG TGAAAAAAAA
CAGTCGATGT CTAAAGGAAC ATTACTTGAA TACCTGTATG CAGAAGAGAA GGAGACCCAT
CCATACCAGA TCGACAAAAA TACCTACAAA ATGATAAAGT GCCGTGTGGT AGAGAATGGT
AAATCGGCAA GTGGTAGCGA AAAAGCACTG TTAAACAAGA TTGTTTGGTT TGCTTCGGGT
CTCAATAGTG ACTTTGACAT TTTAGAAGAT TCCTCTGCTG TCCTATCAGA ACCAGTTTCA
GAACCTAAAT GGATGTCGGA CAAGGCGGCA ATGATTAGGG ACGGTAGTGT GGTTTCTTTA
CTCCCACTCC TATTTAGAGA GGGGATAAAG GTTTCAGCTG GGGAAGATAT CGGTTACATG
GGACTGCATG AGTACAGTAA CGATGCAATT GGAACTAAGA AAGAAGATAA TCGTGTGCAT
ATCGAGATGT TCTCTTTTGA GGAGCCGCCC GAATTTTTCA AAAAACAGAT TTCTCCCAAA
AATGCGGAAG AAAATCCACT TGTTGTTCTC GATGGAGCCG ATAGTAGCGG TGCCGTTGAT
ATGAGTAATT CGTTTATTCA GCAATTACTT GAATCTGTGA CAGAAGATCA AGTAACGGAC
TTCTCCTCGT TCACTGCTCG CGATGCCAAA GTATACTTAG ACGGTAAGCG TAAACACTTT
GAGCGATTTA TTGTGAAACA TCCTACAGAT TGGCATACAG AGTCGTCACA AAGTCTTTAT
GAATCAATCC ATCAGACCGC AAAGGAAGCT CTAGATATTA AGTGCTCCGC TGGTTTTGTG
ACTATAGAGG ACTACCGTAA CTCCCCATGG CGCGATCAAG TGATGGATAG CTTTGATCTT
TTCTCGCAAT TCGAACTGGA AAGAGCAGAT AAGTTCTCAT GGATGCAAGA TTTACAAGGT
GATTTGCAAC TAAGCGATGA TAAGAGTCTT TGGCATTATT GGCCTTTTAT TCCTCAAACT
CAAGGTGCCT TTAAGTTTAC TCTAGAAATG CTACAAGAGG TATACCCTGA AGTTAAAGAC
TCTAAGCGGG ATGTCTTACA AGGTATTGTT AATGAACTAA ATGATCACAT GCTTTTTTAT
AAGCTAGATA CGCCTTTACG TAGAACACAC TTTTTTGCTC AGCTTATGCA AGAAACCGGT
GAGAGCCTAA ATATGGCTGA ATATACCAAT TATCGTATTT CTACGCTGGA TACATCAGAA
TTTAATACTG CTAGGTCACG TCGATATCCT TTAGATCACC CTAAATATGC AGGTAAGCGC
TATATTGATG TTCACGGTAT CGCAGACAAG AAAAATGGTA AATTCGTTAA AAAAGATGGT
ACTTCTCCTA CTCTTGATGA CAAAAGGATA TTGTTTAACG TTATGTATGG AGGCAGAAGC
GAAATGAAGA ATGGTGATTT TTTGACAACT GATGATGGGT GGATTTTTAG GGGGCGTGGA
TTAAAACAGC TTACCGGCAG AGACAATTAT GAGCGTTTCA ATAAATGGCA TTTACAAAAT
CAATCAGAGT GGCCATTGGA CGTCGTAGAT TTTTTAAATA CACCAGAGCT TATATTAGAG
GCTAAATATG CGACTCGCTC TGCTGCTTGG TTTTGGCTAG ATATTAAAGG TCCTGAGAGG
GCAGATAAAG GAGCCAACGA TAAAGTTGTG AATGAAATAA CACGTAAGGT AAACCGTTAT
ACTAGCAATA AATCTTACCG GAAGCGTAGA GAAAACTTCA AACTTTTATG GGAAAATAAG
GTATTTAACT AA
 
Protein sequence
MDAVFPIAQR EGGAYYTLSD FTKLFDQAKS GRYLIGQGYG WHSGIHLTSK MLPWGKGLRP 
IQAMLDGKIV AFRINPDYLT STYQEQEFKY SNNFVLIEHE AVNPEDNEDV FKFYTLYMHL
APPSDIGANS SITTRYRLQE ARNVRTFKHS DVPTNSGEKK QSMSKGTLLE YLYAEEKETH
PYQIDKNTYK MIKCRVVENG KSASGSEKAL LNKIVWFASG LNSDFDILED SSAVLSEPVS
EPKWMSDKAA MIRDGSVVSL LPLLFREGIK VSAGEDIGYM GLHEYSNDAI GTKKEDNRVH
IEMFSFEEPP EFFKKQISPK NAEENPLVVL DGADSSGAVD MSNSFIQQLL ESVTEDQVTD
FSSFTARDAK VYLDGKRKHF ERFIVKHPTD WHTESSQSLY ESIHQTAKEA LDIKCSAGFV
TIEDYRNSPW RDQVMDSFDL FSQFELERAD KFSWMQDLQG DLQLSDDKSL WHYWPFIPQT
QGAFKFTLEM LQEVYPEVKD SKRDVLQGIV NELNDHMLFY KLDTPLRRTH FFAQLMQETG
ESLNMAEYTN YRISTLDTSE FNTARSRRYP LDHPKYAGKR YIDVHGIADK KNGKFVKKDG
TSPTLDDKRI LFNVMYGGRS EMKNGDFLTT DDGWIFRGRG LKQLTGRDNY ERFNKWHLQN
QSEWPLDVVD FLNTPELILE AKYATRSAAW FWLDIKGPER ADKGANDKVV NEITRKVNRY
TSNKSYRKRR ENFKLLWENK VFN