| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000387 |
|---|
| Symbol | |
|---|
| ID | 8558693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 440194 |
|---|
| End bp | 441567 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646408053 |
|---|
| Product | putative Cytochrome bd2 subunit I |
|---|
| Protein accession | YP_003287540 |
|---|
| Protein GI | 262395687 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGCC TCGACGCATT TATGCTTGCA CGGATACAGT TCGCCTTTAC GGTATCCTTT
CATATTATTT TCCCCGCTAT CACCATAGGT CTGGCCACCT ATCTCGCCGT GCTGGAAGGC
TTATGGCTAA AAACACGTAA TCCCGATTAC CAAAAGCTCT ATCACTTCTG GTCGAAAATT
TTTGCGGTTA ACTTTGGGAT GGGCGTTGTA TCTGGCCTTG TCATGGCCTA TCAATTCGGC
ACCAACTGGA GTGGTTTCTC CGACTTCGCT GGTTCTATCA CTGGCCCATT ACTGACTTAT
GAAGTGTTAA CGGCTTTCTT TCTCGAAGCT GGATTTCTTG GCGTGATGCT ATTCGGTTGG
CGTCGCGTCG GCGAAAAGCT GCACTTTTTT GCAACCTCGA TGGTGGCGTT AGGCACGATC
ATTTCGACGT TCTGGATTCT CGCCTCCAAC AGTTGGATGC AAACGCCACA AGGCTATGAA
ATTGTCGACG GACGTGTGGT GCCAACCGAC TGGTTTGCTA TCGTTTTCAA TCCTTCATTT
CCTTATCGTT TGGCGCACAT GAGCGTCGCG GCTTTCGTTA GTTCCGCACT CTTTGTAGGC
GCGTCAGCCG CTTGGCATTT ATTGAGAGAC AATCAATCGA CTGCGGTAAA AACGATGTTT
TCGATGTCGC TCGGGATCTT AGTGTTCCTT GCGCCACTCC AAGCCGTGAT TGGCGATGTA
CATGGGTTAA ACACTCTCAA ACACCAGCCC GCCAAAATCG CTGCCATCGA AGGACATTGG
GATAACAGCG ATGGCAAACC AACCCCATTG ATATTGTTCG GCATGCCAAA CATGGAACAA
GAACGCACAG ACTATGCCTT AGAAATTCCT GTTCTAGGAA GTTTGATCCT ACGCCACAGT
TTAACTGAGC CAATCCCGGC GCTGAAAGAC TTCCCGAAAG AGGAACGACC GAACTCACCT
ATCGTCTTTT GGTCATTTCG AATCATGGTC GGACTAGGAC TTCTGATGAT TTTTCAAAGC
TTCTACAGCA TGTGGTTACG AAAAAAGAAC ACGCTTTATA CCTCGCGTTG GTTCCTCAAG
TTTTCATTGT TTATGGGGCC ATCTGGTCTT ATCGCAATAC TTGCTGGCTG GTTTACGACA
GAGGTTGGTC GGCAACCTTG GGTCGTGTAT GGCGTACAAA AAACGCGTGA TGCGGTTTCT
GCACATGGAG ACCTACAAAT GAGCATCAGC CTGCTGTGTT TCCTTGTTGT ATACAGCTTG
GTATTTGGTT TTGGTTATTA CTACATGATC CACCAAATCA AGAAAGGCCC CGATGCAATC
GAGCACGATG AGCACGATGA GCACGACATG ACGACCGTTT CAGGTCGCAT TTAG
|
|---|
| Protein sequence | MFGLDAFMLA RIQFAFTVSF HIIFPAITIG LATYLAVLEG LWLKTRNPDY QKLYHFWSKI
FAVNFGMGVV SGLVMAYQFG TNWSGFSDFA GSITGPLLTY EVLTAFFLEA GFLGVMLFGW
RRVGEKLHFF ATSMVALGTI ISTFWILASN SWMQTPQGYE IVDGRVVPTD WFAIVFNPSF
PYRLAHMSVA AFVSSALFVG ASAAWHLLRD NQSTAVKTMF SMSLGILVFL APLQAVIGDV
HGLNTLKHQP AKIAAIEGHW DNSDGKPTPL ILFGMPNMEQ ERTDYALEIP VLGSLILRHS
LTEPIPALKD FPKEERPNSP IVFWSFRIMV GLGLLMIFQS FYSMWLRKKN TLYTSRWFLK
FSLFMGPSGL IAILAGWFTT EVGRQPWVVY GVQKTRDAVS AHGDLQMSIS LLCFLVVYSL
VFGFGYYYMI HQIKKGPDAI EHDEHDEHDM TTVSGRI
|
|---|
| |