| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000377 |
|---|
| Symbol | |
|---|
| ID | 8558683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 427112 |
|---|
| End bp | 428281 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646408043 |
|---|
| Product | isovaleryl-CoA dehydrogenase |
|---|
| Protein accession | YP_003287530 |
|---|
| Protein GI | 262395677 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.749145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTA CCTACTCTTC CCTGAACTTT GTTTATGACG AAAATACCGA TTTGCTTCGC
GAGCAAATCA ATAGTTTTGC TGCAAGAGAA ATTGCGCCGC TAGCGCAATC TATCGACCAA
TCTAACGACT TTCCAAACCA TCTTTGGTCC AAACTGGGTG ACATGGGTCT TTTAGGTGTG
ACCACCAGCG AAGAGTTTGG TGGAGCAGGC ATGGGTTATC TCGCCCACGT TATCGCTATG
GAAGAAATCA GTCGAGCATC CGCTTCGGTT GCGTTAAGTT ACGGCGCGCA CTCCAATCTT
TGTGTCAACC AAATCCACCG CAACGGCACA CAAGCACAAA AAGAAAAATA CCTACCAAAA
CTCATCTCCG GTGAACATAT CGGTGCCCTT GCCATGAGTG AACCCGGTGC AGGCTCAGAT
GTGGTCTCTA TGCAGCTTAA AGCGGAACGT AAAGGCGATA TATTCCTGCT AAATGGCAAC
AAAATGTGGA TCACTAACGG CCCAGATGCG CACACCTATG TTGTCTACGC CAAAACCGAC
CCAAGCCAGC ACTCCAAAGG CATCACGGCC TTTATCGTAG AACGCGGTTT TCCTGGATTC
ACTCAAGCAC AAAAACTCGA CAAGTTGGGT ATGCGCGGCT CGAATACGTG TGAGCTGGTC
TTCCAAAACT GTGAAGTCCC TGCGGAGAAT ATTCTCGGCG AAGAAAACCA AGGTGTGAAA
GTATTGATGA GCGGCCTCGA CTACGAACGT GTGGTACTTG CCGGTGGCCC GCTTGGCATC
ATGCAGGCCT GCATGGACAT CGTTGTGCCT TACATTCACG ACCGCAAACA GTTTGGCAAA
TCCATCGGTG AATTCCAGCT AGTTCAAGCA AAAATCGCTG ATATGTACAC GCAAATGAAC
GCCGCTAAAG CGTATGTTTA CGCCGTTGCT GCTGCTTGTG ATCGCGGTGA AACCACACGT
AAAGATTCTG CTGGTGCGAT CCTCTACAGC GCAGAACTGG CAACCAAAAT GGCATTAGAT
GCCATTCAGC TACTCGGTGG TAACGGCTAT ATCAATGAGT TTGATACCGG TCGTTTACTT
CGTGATGCCA AGCTGTATGA AATCGGAGCC GGCACTTCAG AAATTCGCCG CATGCTTATT
GGTCGGGAAT TGTTTAACGA AAGCGCCTAA
|
|---|
| Protein sequence | MKSTYSSLNF VYDENTDLLR EQINSFAARE IAPLAQSIDQ SNDFPNHLWS KLGDMGLLGV
TTSEEFGGAG MGYLAHVIAM EEISRASASV ALSYGAHSNL CVNQIHRNGT QAQKEKYLPK
LISGEHIGAL AMSEPGAGSD VVSMQLKAER KGDIFLLNGN KMWITNGPDA HTYVVYAKTD
PSQHSKGITA FIVERGFPGF TQAQKLDKLG MRGSNTCELV FQNCEVPAEN ILGEENQGVK
VLMSGLDYER VVLAGGPLGI MQACMDIVVP YIHDRKQFGK SIGEFQLVQA KIADMYTQMN
AAKAYVYAVA AACDRGETTR KDSAGAILYS AELATKMALD AIQLLGGNGY INEFDTGRLL
RDAKLYEIGA GTSEIRRMLI GRELFNESA
|
|---|
| |