Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000375 |
Symbol | |
ID | 8558681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 425292 |
End bp | 426470 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 646408041 |
Product | 3-ketoacyl-CoA thiolase (isoleucine degradation) |
Protein accession | YP_003287528 |
Protein GI | 262395675 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.587204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATG AAACATGGAT TGTTGCCGCC AAGCGAACGC CTATCGGCTC TTTTCAAGGT GCATTAGCTT CAACAGATGT CACAGAACTC GGTGCGAAAG CCATCCAAGG GGCACTAGCC GAAAGCCAAC TCGATGTGCA AAAAATAGAC GAAGTGTTGA TGGGATGCGT TTTACCCGCC GGCGTGGGGC AAGCGCCAGC AAGACAAGCA AGTCTTAAAG CAGAAATGCC ACAATCGATC GGTTGTACGA CACTGAATAA AGTCTGTGGT TCGGGTATGA AAACCGTCAT GCTGGCACAT GATCTTATTC AATCTGGTAA CGCGCACGCG GTTATCGCTG GCGGTATGGA AAACATGTCC TCTTCTCCTT ATCTACTTAA GAAAGCGCGT GATGGTTTCC GCTTAGGCCA TGAGCAAGTG CTTGATCATA TGTTTTATGA CGGTTTGCAG GATGCCTACC AAGGCGAATT GATGGGTGTC TTTGCCGAAC AAACCGCGCA AAAGTATCAA TTCAGCCGTG AAAGTATGGA TATCTGGGCG CAGCAGTCGT TGACTCGCGC GCAGCAAGCG ATTGAGCAAG GTTTGTTCAA AGAAGAGATC GTGCCTGTTA ACGTAAAAAG TCGACGCGAC GAAACCTTGG TGGTAGACGA TGAGCAACCG AGCAAACTCG ACGTCACTAA AATTCCTACC TTACGCCCTG CGTTTGCCAA AGATGGCGGC GTAACCGCAG CAAACTCTAG TTCCATTTCG GATGGTGCGT CGGCAATGAT CTTAGTCGAT AGTGAGTTTG GTCGTCAGGA AAACCTTCAG CCTCTAGCCA AAATTGTCGC GTACAGCACG CATGCAAGAC AGCCTGATGA GTTCACCATC GCACCAGTCT TCGCGATTGA ATCGCTGCTG GAAAAAACGG GCTGGGACAA ATCAGACGTG GACCTTTGGG AAATCAATGA AGCTTTTGCT GTCGTGACTC AATACGCGGT GAAAGCTCTC GAACTGAACG AGAGCAAAGT GAACCCTCGC GGAGGGGCTT GTGCGCTGGG GCATCCAATA GGCGCAAGTG GCAATCGAAT CCTTGTCACT TTGATTCATG CGCTAAAACA AACTGGTGGT AAGCGTGGCG TTGCATCGCT TTGTATTGGC GGCGGCGAAG CTACCGCTAT CGCGATTGAA ATCTGCTAA
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Protein sequence | MKNETWIVAA KRTPIGSFQG ALASTDVTEL GAKAIQGALA ESQLDVQKID EVLMGCVLPA GVGQAPARQA SLKAEMPQSI GCTTLNKVCG SGMKTVMLAH DLIQSGNAHA VIAGGMENMS SSPYLLKKAR DGFRLGHEQV LDHMFYDGLQ DAYQGELMGV FAEQTAQKYQ FSRESMDIWA QQSLTRAQQA IEQGLFKEEI VPVNVKSRRD ETLVVDDEQP SKLDVTKIPT LRPAFAKDGG VTAANSSSIS DGASAMILVD SEFGRQENLQ PLAKIVAYST HARQPDEFTI APVFAIESLL EKTGWDKSDV DLWEINEAFA VVTQYAVKAL ELNESKVNPR GGACALGHPI GASGNRILVT LIHALKQTGG KRGVASLCIG GGEATAIAIE IC
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