Gene VEA_000375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000375 
Symbol 
ID8558681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp425292 
End bp426470 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content50% 
IMG OID646408041 
Product3-ketoacyl-CoA thiolase (isoleucine degradation) 
Protein accessionYP_003287528 
Protein GI262395675 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.587204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG AAACATGGAT TGTTGCCGCC AAGCGAACGC CTATCGGCTC TTTTCAAGGT 
GCATTAGCTT CAACAGATGT CACAGAACTC GGTGCGAAAG CCATCCAAGG GGCACTAGCC
GAAAGCCAAC TCGATGTGCA AAAAATAGAC GAAGTGTTGA TGGGATGCGT TTTACCCGCC
GGCGTGGGGC AAGCGCCAGC AAGACAAGCA AGTCTTAAAG CAGAAATGCC ACAATCGATC
GGTTGTACGA CACTGAATAA AGTCTGTGGT TCGGGTATGA AAACCGTCAT GCTGGCACAT
GATCTTATTC AATCTGGTAA CGCGCACGCG GTTATCGCTG GCGGTATGGA AAACATGTCC
TCTTCTCCTT ATCTACTTAA GAAAGCGCGT GATGGTTTCC GCTTAGGCCA TGAGCAAGTG
CTTGATCATA TGTTTTATGA CGGTTTGCAG GATGCCTACC AAGGCGAATT GATGGGTGTC
TTTGCCGAAC AAACCGCGCA AAAGTATCAA TTCAGCCGTG AAAGTATGGA TATCTGGGCG
CAGCAGTCGT TGACTCGCGC GCAGCAAGCG ATTGAGCAAG GTTTGTTCAA AGAAGAGATC
GTGCCTGTTA ACGTAAAAAG TCGACGCGAC GAAACCTTGG TGGTAGACGA TGAGCAACCG
AGCAAACTCG ACGTCACTAA AATTCCTACC TTACGCCCTG CGTTTGCCAA AGATGGCGGC
GTAACCGCAG CAAACTCTAG TTCCATTTCG GATGGTGCGT CGGCAATGAT CTTAGTCGAT
AGTGAGTTTG GTCGTCAGGA AAACCTTCAG CCTCTAGCCA AAATTGTCGC GTACAGCACG
CATGCAAGAC AGCCTGATGA GTTCACCATC GCACCAGTCT TCGCGATTGA ATCGCTGCTG
GAAAAAACGG GCTGGGACAA ATCAGACGTG GACCTTTGGG AAATCAATGA AGCTTTTGCT
GTCGTGACTC AATACGCGGT GAAAGCTCTC GAACTGAACG AGAGCAAAGT GAACCCTCGC
GGAGGGGCTT GTGCGCTGGG GCATCCAATA GGCGCAAGTG GCAATCGAAT CCTTGTCACT
TTGATTCATG CGCTAAAACA AACTGGTGGT AAGCGTGGCG TTGCATCGCT TTGTATTGGC
GGCGGCGAAG CTACCGCTAT CGCGATTGAA ATCTGCTAA
 
Protein sequence
MKNETWIVAA KRTPIGSFQG ALASTDVTEL GAKAIQGALA ESQLDVQKID EVLMGCVLPA 
GVGQAPARQA SLKAEMPQSI GCTTLNKVCG SGMKTVMLAH DLIQSGNAHA VIAGGMENMS
SSPYLLKKAR DGFRLGHEQV LDHMFYDGLQ DAYQGELMGV FAEQTAQKYQ FSRESMDIWA
QQSLTRAQQA IEQGLFKEEI VPVNVKSRRD ETLVVDDEQP SKLDVTKIPT LRPAFAKDGG
VTAANSSSIS DGASAMILVD SEFGRQENLQ PLAKIVAYST HARQPDEFTI APVFAIESLL
EKTGWDKSDV DLWEINEAFA VVTQYAVKAL ELNESKVNPR GGACALGHPI GASGNRILVT
LIHALKQTGG KRGVASLCIG GGEATAIAIE IC