| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000361 |
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| Symbol | |
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| ID | 8558667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 408770 |
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| End bp | 409948 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646408027 |
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| Product | L-proline Glycine Betaine ABC transport ATP-binding protein proV |
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| Protein accession | YP_003287514 |
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| Protein GI | 262395661 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit
[TIGR03415] choline ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.454619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCAA TTACTATTCA AAATCTTGAT GTGGTTTTTG GTCAGCAGCA GTCACAAGCG
TTAGCACTAC TAGACCAAGG CAAGTCTCGA CAAGAAATCA TCGACGAAAC TGGCCAAGTG
GTTGGGGTTG ATAATGTTTC GCTGAACGTG AAACAGGGTG AGATCTGTGT TTTGATGGGG
CTTTCAGGCT CGGGTAAATC AAGTTTGCTG CGAACAGTTA ACGGGTTGAA CGAAATTTCT
CGTGGCTCTC TGAAAATTAA AGACGGCGAC GACATGGTTG AGCTCTCTAA CTGTGACGAA
CAGAAGTTAC GCCACCTTCG TACTCACCGC GTATCCATGG TGTTTCAGAA GTTTGCATTG
ATGCCATGGT TAACGGTATT AGATAACGTT GCGTTTGGTC TAGAAATGCA AGGCATTGGC
AAAGCAGAGC GCCGTAAAAA AGCGCGTGAA CAGCTCGAAA TGGTCGGTTT GTCTGAGTGG
GAAACGAAAT TCCCGCACGA GCTCTCTGGT GGTATGCAGC AGCGTGTTGG CCTAGCGCGA
GCGTTCGCGA TGGACACAGA TATCTTGTTA ATGGATGAGC CGTTTTCAGC GCTTGACCCA
TTGATTCGTG CTCAGCTTCA AGATGAATTG ATTCTGCTTC AAGAAAAGCT AAACAAAACC
ATTCTTTTTG TGAGCCACGA CTTGGATGAA GCGTTAAAAA TCGGTAATAA CATCGCCATT
ATGGAATCAG GAAAATTGAT TCAACACGGC AAGCCCGAGC AGATCATTCT TGCTCCAGAA
AACGATTATG TGGCTGACTT TGTAGCCCAC ACTAATCCAT TGAACGTACT TAAGGGACGC
TCTTTGATGC GTGACGACTT AGTTCGTGAA GATGAGCGTG TTCTGATTTG CCCTGACAAA
GATATTTGGG TGACCCAAGA GAGCAAAGGC TTAAGCTTAG CGGATACAGA TAAGTCGTTG
GTTCAATGGA AGAGCGATTC TTCGAACCTT GATGAGGTAA ACGAAAATTC TCTGGTTCAG
GTTAGCCCGG AAATCAGTAT GCGAGAAGCG ATTGAGCTTA AGCAGCGCAG CAATCAGCCT
CTGCTTATGG TGGAGGACAA TCAGTTAGTT GGTGTGTTAA GCGACAACGA GCTTTACGAT
GCATTGCTTG GTAACTTTAA GTCCGAGCAA GTGGCATAA
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| Protein sequence | MDAITIQNLD VVFGQQQSQA LALLDQGKSR QEIIDETGQV VGVDNVSLNV KQGEICVLMG
LSGSGKSSLL RTVNGLNEIS RGSLKIKDGD DMVELSNCDE QKLRHLRTHR VSMVFQKFAL
MPWLTVLDNV AFGLEMQGIG KAERRKKARE QLEMVGLSEW ETKFPHELSG GMQQRVGLAR
AFAMDTDILL MDEPFSALDP LIRAQLQDEL ILLQEKLNKT ILFVSHDLDE ALKIGNNIAI
MESGKLIQHG KPEQIILAPE NDYVADFVAH TNPLNVLKGR SLMRDDLVRE DERVLICPDK
DIWVTQESKG LSLADTDKSL VQWKSDSSNL DEVNENSLVQ VSPEISMREA IELKQRSNQP
LLMVEDNQLV GVLSDNELYD ALLGNFKSEQ VA
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