| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000358 |
|---|
| Symbol | |
|---|
| ID | 8558664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 406500 |
|---|
| End bp | 407282 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646408024 |
|---|
| Product | stomatin family protein |
|---|
| Protein accession | YP_003287511 |
|---|
| Protein GI | 262395658 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTCT ATACTGTTGC GGTGATCGTG GTGCTGTTGT TCGCACTTGC GACCCAAATG
TTTAAGGTTT TGAGAGAGTA TGAACGTGGG GTTGTATTCT TTCTTGGTCG CTTTCAAGAA
GTAAAAGGCC CTGGCTTAAT CATTCTTATC CCATTTATCC AACAAATGGT ACGGGTGGAT
TTACGTACTG TCGTTTTGGA TGTGCCGACA CAAGACTTGA TAACCAAAGA TAACGTGTCT
GTGCGCGTCA ATGCGGTTGT TTATTTTCGC GTAGTCGATC CTCAAATGGC AATTAACAAC
ATTGAAAGTT ACAGCGATGC CACCAGCCAG TTAGCGCAAA CCACGCTGCG ATCAGTATTA
GGCCAGCATG AACTGGATGA ATTACTTTCA GAGCGCGAGC GTCTCAATAA GGATTTACAA
TCCATCCTCG ATCAACAGAC TGATGACTGG GGCATCAAGA TTGCCACGGT TGAAGTCAAA
CATGTTGATT TAAATGACAG CATGGTCAGA GCGCTAGCGC GTCAGGCCGA AGCAGAACGT
AACCGTCGTG CGAAAATCAT TCACGCTACC GGTGAGCTAG AAGCTTCTAA TAAATTAAAA
GAGGCAGCTC AAATGCTCAA CGAAGCGCCG AATGCGCTGC AATTGCGTTA CATGCAGACC
CTCACGGAAA TCACGACAGA CAAAACATCG ACTATTATCT TCCCAATGCC GATCAATCTT
GTCGAAGCCG TCAGTGATAT CGCCGAAGCG GTAAAAAAGA ATAAAGAGAC ACAAGATAAA
TAA
|
|---|
| Protein sequence | MMLYTVAVIV VLLFALATQM FKVLREYERG VVFFLGRFQE VKGPGLIILI PFIQQMVRVD
LRTVVLDVPT QDLITKDNVS VRVNAVVYFR VVDPQMAINN IESYSDATSQ LAQTTLRSVL
GQHELDELLS ERERLNKDLQ SILDQQTDDW GIKIATVEVK HVDLNDSMVR ALARQAEAER
NRRAKIIHAT GELEASNKLK EAAQMLNEAP NALQLRYMQT LTEITTDKTS TIIFPMPINL
VEAVSDIAEA VKKNKETQDK
|
|---|
| |