Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000354 |
Symbol | |
ID | 8558660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 398181 |
End bp | 400538 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646408020 |
Product | sensor histidine kinase |
Protein accession | YP_003287507 |
Protein GI | 262395654 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.407699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAT TCAAACTGGT TAATCTCTGC TTTTTTATTG CCATGCTGAC GTGTTGTGTA TTGGCGTATA TGTCACATGT GAATTCAAAA AGTGCACAAG AATTCCACGC GGAGTTGACG GATATTGGGC ACAAGTTGAT TGAAGAGCGC GATGTTATCG TGAATCGATA TGCGGTTGAA GATAGGAAGA ATTATGAACT GACGACATCT TTAGTAGATA TAGAAGTCGC TGCAGAGAAA TTGCTAAATT CATCAAGGGA GTCAGTTTGG TTCCCTGTGA CGCCCAATCA TAAAAAAGTT GAGGATACGC TCAATCTATT CAAAAACCGT GTGCTTGATA CAACGCTGAA GCTCGATATG TTGATTGGCG TTCAGGTAGA GAATCAATAC GCGTTATTAA TGCTATTCAA CTTATATCAG CAAGATATTT CTACCGATAC CGGAAAGACG TTGAGTGGGC ATCACTATTT TGAGTTTCTC AACCAACTGC TTTTGACACA AAACGTAGTT GAGAGTGAAA GTGAAGCCAA TTTCTTAGAT CGGCTTCAAG CGAGCGATAA AAGGATAGAA CTACTCACGA ATGAACTGCT TGATCATGGA TACTTTGTTT TTATCGAGGA TGCGGAGCAT CGGCTGCTCA ATATTGCCCA AAGTGAAGCG CGTTTTACTT GGTTGTTTGT TTTTATTGCC GTGATGTTGT TAGTCAGTGC ATTCTTGTAT CAATCGCAAT ATCGAATGTA CAACTTGAAA CAATTGAACC TCGAAATCGA GGAGGCGCGA AATAAAGCCG AGCGAGCAGC AAAAGCCAAA TCAAGTTTTC TCGCCGCAAT GAGTCACGAA TTAAGAACGC CGATGAATGG TGTATTAGGC CTTTCTCAAA TGATTGCAGA GGAAACCAAT GAGCCGACGA CTAAAGAGTA CGTGAAAGTC ATTCTTGATT CTGGCCAACA CTTGATGACG ATTCTCAACG ATATTTTGGA TTTCTCTAAA GTTGAAGAAA ACAAACTGGA ATTTGAGCAG GCTAAGTTCA ATTTAGATCA AGTCATTTCT CCTGTGTGTA GCGCAATAAA ACCGCTCATC GATGAAAAAA ATATCGAATT GATCGTGGAA AATGAAGTGC CTGAATACGT TGAATTTACC GGAGACTGCG CACGTTTACG ACAGATCTTG TTTAATCTTG CTGGCAACGC GGTGAAGTTT ACCAGTGAAG GGCATGTGTT AATCAGAACG GAACTTGATA AGGTAAATCA TTGCTTGGTG ATGATTGTGA GTGATACTGG TATTGGTATC GCGCTAGACA AGCAAGAACA TGTTTTCAAC TCGTTTGAGC AAGCCGATTC TTCAACTACC CGAAAATTTG GAGGCACAGG GCTTGGTTTG GCAATAGTTA AAAAATTAAC TGGCTTGATG GATGGCAAGA TTACATTGAA AAGTGTGGAG GGTGTCGGAA GTCAATTCAT CGTCGAGCTG CCCATTCCTT GGGTTGAATG CGAACTTCCA AAGGCACAAG AGCCCCCAAA AACGCGCAAG AAAACACACA ATTTGCAGAT ATTGCTTGCT GAAGATAATC GAGTGAACGC CATTGTAGCG AAAGGGTTTT GCGAAAAGTT GGGACATGAG GTCGATGTTG CTGAAAACGG ATTGGTGGCG GTTAAAAAGG CGAGAGATAA CGAATATGAC CTGATTCTAA TGGACAATCA CATGCCTGAG ATTAATGGTG TTGAAGCGAC GCGTGTGATT CGACAAGAGT TAGGTATCAA AACATTACTC TTTGCGTATA CGGCAGATGT CTTTCGTGAG GCGCATGATA GCTTTATTCA AGCCGGAGCG GATCATGTGC TTACAAAACC GCTACAACAA GAGAGCTTTT CGGACGCTCT TAAACAGTTT GCGACGAGGC TCGAACCAAA AGAGAATTTA CCATTAACGA ATGACAACAA CGTTCTCCAG TTGCAGCGCA AGCCAATAGA GAAGCTACGG CTGACAGAAG AAGAGTTATC CAGTTCAGAG ATGCTCATTT CTTTGCAAGA AGCGCCGGAA GCGATAGATG AGCTACTAAA AAGTATTATT GTCGATTTTG AATCATCGGT TGATGAACTT ATTGATTATT TTATGGCTGA AGATTTCGCG TCTCTAGAAG ACACGTTGCA TAAAACAAAA GGTATGGCAT TGAACCTTGG TTTGCCGATT TTAGCTGGAC AAACGGAGGC GCTAGAAAAC ACGCTCAAAG CGAAGCAAAC TCCTGAAATT GAGCGGTTAC AGATGCTAAT CAACCGATTA CAAGTCAACA TCCATCAGGC TAATCGACTT CTGGATGACA TACAGAAAAA AAACGTCGAT CCTCAACAAA TTTTGTAA
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Protein sequence | MSKFKLVNLC FFIAMLTCCV LAYMSHVNSK SAQEFHAELT DIGHKLIEER DVIVNRYAVE DRKNYELTTS LVDIEVAAEK LLNSSRESVW FPVTPNHKKV EDTLNLFKNR VLDTTLKLDM LIGVQVENQY ALLMLFNLYQ QDISTDTGKT LSGHHYFEFL NQLLLTQNVV ESESEANFLD RLQASDKRIE LLTNELLDHG YFVFIEDAEH RLLNIAQSEA RFTWLFVFIA VMLLVSAFLY QSQYRMYNLK QLNLEIEEAR NKAERAAKAK SSFLAAMSHE LRTPMNGVLG LSQMIAEETN EPTTKEYVKV ILDSGQHLMT ILNDILDFSK VEENKLEFEQ AKFNLDQVIS PVCSAIKPLI DEKNIELIVE NEVPEYVEFT GDCARLRQIL FNLAGNAVKF TSEGHVLIRT ELDKVNHCLV MIVSDTGIGI ALDKQEHVFN SFEQADSSTT RKFGGTGLGL AIVKKLTGLM DGKITLKSVE GVGSQFIVEL PIPWVECELP KAQEPPKTRK KTHNLQILLA EDNRVNAIVA KGFCEKLGHE VDVAENGLVA VKKARDNEYD LILMDNHMPE INGVEATRVI RQELGIKTLL FAYTADVFRE AHDSFIQAGA DHVLTKPLQQ ESFSDALKQF ATRLEPKENL PLTNDNNVLQ LQRKPIEKLR LTEEELSSSE MLISLQEAPE AIDELLKSII VDFESSVDEL IDYFMAEDFA SLEDTLHKTK GMALNLGLPI LAGQTEALEN TLKAKQTPEI ERLQMLINRL QVNIHQANRL LDDIQKKNVD PQQIL
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