Gene VEA_000335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000335 
Symbol 
ID8558640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp378808 
End bp379539 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content43% 
IMG OID646408000 
Productribosyl nicotinamide transporter PnuC-like protein 
Protein accessionYP_003287488 
Protein GI262395635 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3201] Nicotinamide mononucleotide transporter 
TIGRFAM ID[TIGR01528] nicotinamide mononucleotide transporter PnuC 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.258606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTAC TTGCCTTACT CGATATAAAC AACACCCTGG TTAACATTCC AATTGGCGGC 
GGTTACGCAA TGAGTTGGAT CGAAGCTTTC GGTACGGTTT TTGGATTGCT TTGCATTTGG
TTTGCTAGCC AAGAAAAAAC CATCAACTAC TTATTCGGTT TGCTGAATGT CACTCTTTTT
GCCGTTATCT TTTTCCAAAT TCAGTTATAC GGATTATTAC TTCTTCAACT GTTTTTCTTC
TGTGCGAACA TTTACGGTTG GTATGCGTGG ACTCGTCCAA ACGCGGAAGG TGAAACGCTG
GAAGTACGCT GGTTAAACAA ACAGAAACTC ATCGCCACTG CTTCTATTAG CGTTGTGTCT
ATCGCGTTGT TAACCATCTA CATCGACCCT TTTTTCTTTG CATTAGCAAA CATTGCTGTT
GATAGCTTGA ATCTCTTTGG TGCAGGTTTG GCTGATCCGG TACTTGAACC TGATGCGTTC
CCGTTTTGGG ATGCAACCAT GACAGTACTT TCTGTTGTTG CACAAATTCT GATGACACGT
AAATATGTGG AAAACTGGAT TCTTTGGGTT GTGATTAACA TCATCAGTGT TGGCATCTAC
GCGACACAGG GTGTTTATGC GATGTCTGTT CAGTATGCGA TTTTGATGTT CATTGCTGCC
AATGGTACGC GTGAATGGGC CCGTAGCGCC AAGCGCAATG GCGATAAAAC CTTAGCTCAA
GCTGCAGCTT AA
 
Protein sequence
MDLLALLDIN NTLVNIPIGG GYAMSWIEAF GTVFGLLCIW FASQEKTINY LFGLLNVTLF 
AVIFFQIQLY GLLLLQLFFF CANIYGWYAW TRPNAEGETL EVRWLNKQKL IATASISVVS
IALLTIYIDP FFFALANIAV DSLNLFGAGL ADPVLEPDAF PFWDATMTVL SVVAQILMTR
KYVENWILWV VINIISVGIY ATQGVYAMSV QYAILMFIAA NGTREWARSA KRNGDKTLAQ
AAA