| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000334 |
|---|
| Symbol | |
|---|
| ID | 8558639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 378066 |
|---|
| End bp | 378797 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646407999 |
|---|
| Product | N-Ribosylnicotinamide phosphorylase |
|---|
| Protein accession | YP_003287487 |
|---|
| Protein GI | 262395634 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2820] Uridine phosphorylase |
|---|
| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00958039 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAC AACCTCATAT TGGTGTTGAT GAAACACAAG TCGCTCCTCT CGTCATTGTA
TGTGGTGAGC CAGACCGAGC TAATCGTATT GCCGCATTAT TGGATGATGC AGAAATGATC
TCGGAAAATC GCGAGTACCG TGTTTTTACT GGCAAATACA AGGACCAGCC TGTTTCAGTA
TGCAGCACAG GCATCGGCGC CCCATCGATG ATCATCGCAG TTGAAGAGCT AAAACAGTGC
GGTGTCACTC ATGTAGTACG TGTTGGATCG GCCGGTGCGA TGCAATCAGG CATTCAGCTT
GGCGAGCTAA TCATTGCCGA AGGTGCGGTA AGAGATGAAG GCGGCTCCAA AGCGTATGTG
GATTCGGCTT ATCCGGCGTA CGCAAGCTTT TCCTTATTAA AGGAAGTTGA GCGTTACCTG
TCAATACAAG AGGCGCGTTA TCATTTCGGT GTGGTACGTT CTCACGACAG TTTCTATACC
GATGACGAAG ATGCGATATG CCAATACTGG AACAAGAAGG GCGTCTTAGG TGCCGATATG
GAAACCTCAG CTTTGCTTGC CGTTGGCCGA TTACGTGGCC TTCATGTGGC TTCGATCTTA
AATAACGTCG TTTTGTATCA ACAAGATGTG AAAGAAGGGG TTGGCCAGTA CGTTGATGAA
GCGAAAGTAA TGATGCAAGG TGAGAAGCTT GCTGCAATGA CGGCGTTAGA AGCGCTGATT
GCTCAGAGAT AG
|
|---|
| Protein sequence | MAKQPHIGVD ETQVAPLVIV CGEPDRANRI AALLDDAEMI SENREYRVFT GKYKDQPVSV
CSTGIGAPSM IIAVEELKQC GVTHVVRVGS AGAMQSGIQL GELIIAEGAV RDEGGSKAYV
DSAYPAYASF SLLKEVERYL SIQEARYHFG VVRSHDSFYT DDEDAICQYW NKKGVLGADM
ETSALLAVGR LRGLHVASIL NNVVLYQQDV KEGVGQYVDE AKVMMQGEKL AAMTALEALI
AQR
|
|---|
| |