| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000319 |
|---|
| Symbol | |
|---|
| ID | 8558624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 346963 |
|---|
| End bp | 347418 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646407984 |
|---|
| Product | methylglyoxal synthase |
|---|
| Protein accession | YP_003287472 |
|---|
| Protein GI | 262395619 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1803] Methylglyoxal synthase |
|---|
| TIGRFAM ID | [TIGR00160] methylglyoxal synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA CCATTCGTAC CATGCCAACC CACAAACATG TGGCTTTGGT TGCCCATGAC
AACTGCAAAC CTGAGCTACT TCGCTGGGTA AAAGAAAACA AAGAAAAACT GCAGAGTCAC
TTTCTTTACG CGACTGGCAC AACCGGACAC ATGTTGAGCA AAGAAACTGG ACTGGCGATT
AAGAGCATGA TCAGTGGCCC AATGGGCGGT GACCAACAAC TTGGCGCGCT CATTTCAGAA
GGTAAGATCG ACGTTCTCGT TTTCTTCTGG GATCCGCTAA ACGCCGTACC TCACGACCCA
GACGTTAAAG CGCTTCTTCG TATTGCTAGC GTTTGGAATA TTCCTGTGGC AACGAACCGA
GCCACCGCTA AGTTCTTGTT TAACTCCCCT CTTCTTGAGC AAGAAGTGGA TATTGAAGTA
CCGGATTACG AAGCGTATCT TGCTGAACGC ATGTAA
|
|---|
| Protein sequence | MQKTIRTMPT HKHVALVAHD NCKPELLRWV KENKEKLQSH FLYATGTTGH MLSKETGLAI
KSMISGPMGG DQQLGALISE GKIDVLVFFW DPLNAVPHDP DVKALLRIAS VWNIPVATNR
ATAKFLFNSP LLEQEVDIEV PDYEAYLAER M
|
|---|
| |