| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000318 |
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| Symbol | |
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| ID | 8558623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 345894 |
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| End bp | 346898 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407983 |
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| Product | periplasmic protein TorT precursor |
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| Protein accession | YP_003287471 |
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| Protein GI | 262395618 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02955] TMAO reductase system periplasmic protein TorT |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.393901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTAAAA ATCAACACGC ATTTCGCACA ATTTTCAAAC ATTCAGCAGT CACATTAGCC
CTCGTCGCTT CTTTACCAGT GGTTGCAGCA GAAAAAGTAT GTGCCATTTA CCCTCACCTA
AAGGATTCAT ACTGGTTATC CGTAAACTAT GGAATGGTGT CCGAAGCGAA AAAAGAAGGC
GTCGAGCTGA GAGTCCTTGA AGCAGGCGGC TATCCCAACA AAACGCGTCA AGAGCAACAA
CTCGCACTGT GCAGCCAATG GGGAGCAGAT GCGATTGTCC TTGGGACCGT GGACCCACAG
GCCTATGAAC ATTCGCTTAA GAATTGGGTC GGAAACATTC CTGTCTTTGC TACTGTGAAC
CAACTCGATC TGGATGAAGA GCAAAGTGAG CTGTTAAAAG GTACGGTCGG TGTTGACTGG
CACTGGATGG GATACGAAGC AGGAAAATAT CTGGCTGCTC GCCACCCAAA GGGATCAGGA
AAAACAAATA TTGCCTTACT TTTGGGGCCG CGTACTCGTG GAGGTACGAA GCCCGTGACT
GCCGGATTTT ATGAAGCGAT CCAAGAAAGC GATATCAACA TCGTTGACTC GTTTTGGGCA
GACAACGACA AAGAGTTACA GCGTAACCTG GTTCAACGTG TGATTGATAT GGGAAATATA
GATTATATCG TTGGCAGCGC GGTTGCGATT GAAGCCGCTA TCAGTGAACT GCGTAGCGCA
GGCAAAGCTG AGGAGATCGG TTTGGTTTCT GTGTACTTAA GTCACGGTGT TTACCGAGGA
CTATTGCGTA ACAAAGTGCT CTTCGCACCA ACAGATAAAA TGGTGCAGCA AGGCAGGCTT
TCCGTCATGC AAGCAGCACA TTACTTAAGG GGCAAAGAGT ATGACAAACA TGCCTCACCA
ACGATCAAAC CACTGACTCC GAAGACGCTT CATGACGATA CGATCGAAGA ATCGTTATCT
CCGTCAGAAT ATAGGCCGAC ATTCCGTGTT AAGGCTGTTG ATTGA
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| Protein sequence | MVKNQHAFRT IFKHSAVTLA LVASLPVVAA EKVCAIYPHL KDSYWLSVNY GMVSEAKKEG
VELRVLEAGG YPNKTRQEQQ LALCSQWGAD AIVLGTVDPQ AYEHSLKNWV GNIPVFATVN
QLDLDEEQSE LLKGTVGVDW HWMGYEAGKY LAARHPKGSG KTNIALLLGP RTRGGTKPVT
AGFYEAIQES DINIVDSFWA DNDKELQRNL VQRVIDMGNI DYIVGSAVAI EAAISELRSA
GKAEEIGLVS VYLSHGVYRG LLRNKVLFAP TDKMVQQGRL SVMQAAHYLR GKEYDKHASP
TIKPLTPKTL HDDTIEESLS PSEYRPTFRV KAVD
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