Gene VEA_000288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000288 
Symbol 
ID8558593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp308704 
End bp309885 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content44% 
IMG OID646407953 
Product8-amino-7-oxononanoate synthase/CqsA 
Protein accessionYP_003287441 
Protein GI262395588 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.331723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA CTATACAAAG CAAACCACTT CCTTCCTTTA TTGAGGAACG CCTAGATTTT 
CATATTCAAG ATCTAATTGA ACCGAACGAG AACAAGAAAC ACCTTGTTCT TGGTAAACGT
CCACCATGTA ATGCCGTTGT TATGCAAAGC AATGATTACC TGGCACTGTC TCATAACAAG
GAGATTCAAA ACGCGCATCG TGATGCGATT TCTCAACACG ATGACAACGT CGTGATGTCC
GCAATTTTCT TGCAAGATGA TGAGTCGAAA CCTGCATTTG AAACTCAACT AGCCAGTTTT
GTCGGCATGC CTAGCTGTCT GCTTTCTCAA TCGGGATGGG CTGCGAATGT CGGTTTATTA
CAAACTATTT GTGCACCGAA CATACCTGTG TATATCGACT TCTTTGCGCA TATGTCTTTA
TGGGAAGGTG CACGTATCGC AGGAGCACAA ATTCATCCGT TCATGCATAA CAACACCAAC
CACTTGCGAA AACAGATTTC ACGCCATGGT TCGGGGATTA TTGTTGTGGA TTCGGTTTAC
AGCACTATCG GAACCATTGC TCCTCTACGT GATATCTACG AAATAGCACA AGAGTTTGAC
TGCGGCTTAG TTGTGGATGA ATCGCACTCG TTAGGTACGC ACGGTCCGCA AGGCGCTGGG
CTACTGCAAG AGCTGGATTT GACTCATATG GTGGATTTTG TAACCGTAAG TCTTGCAAAG
ACATTTGCTT ATCGTGCTGG CGCAATTTTA GGTGCAGAAA AGCTGGCTAA GACGCTTCCA
TTTGTCGCGT ATCCTGCCAT TTTCAGCTCC ACCGTGTTAC CGCAAGAAAT TATTCGGTTA
GAAAAAACAC TGGACGTCAT AAAAAAAGCC GATGACAAGC GGGAGATTTT GTTTAAAAGA
GCGAAGTCTC TAGCCGTTGG TTTAAAACGT ATTGGGTTTA CTATTCGCAG TGAGTCGCAA
ATTATCGCGC TAGAATGTGG CAACGAAAGA AACACTGAGC GAGTTCGCGA CTTTCTAGAA
GAAAGGAATG TCTTTGGTGC AGTTTTCTGT CGCCCTGCAA CAGGAAGAAA CAAGAACATC
ATTCGTTTTT CTGTCAATGC GGACATGACT GCCGCCGAAG TCGATCACGT TCTTTCCGCC
TGCCAAGAAG CGTTTGTTCA TCCCGATCTA GAGTTTGTAT AA
 
Protein sequence
MSETIQSKPL PSFIEERLDF HIQDLIEPNE NKKHLVLGKR PPCNAVVMQS NDYLALSHNK 
EIQNAHRDAI SQHDDNVVMS AIFLQDDESK PAFETQLASF VGMPSCLLSQ SGWAANVGLL
QTICAPNIPV YIDFFAHMSL WEGARIAGAQ IHPFMHNNTN HLRKQISRHG SGIIVVDSVY
STIGTIAPLR DIYEIAQEFD CGLVVDESHS LGTHGPQGAG LLQELDLTHM VDFVTVSLAK
TFAYRAGAIL GAEKLAKTLP FVAYPAIFSS TVLPQEIIRL EKTLDVIKKA DDKREILFKR
AKSLAVGLKR IGFTIRSESQ IIALECGNER NTERVRDFLE ERNVFGAVFC RPATGRNKNI
IRFSVNADMT AAEVDHVLSA CQEAFVHPDL EFV