| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000280 |
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| Symbol | |
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| ID | 8558585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 300398 |
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| End bp | 300928 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407945 |
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| Product | MSHA pilin protein MshA |
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| Protein accession | YP_003287433 |
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| Protein GI | 262395580 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.528287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAC AAACTGGATT TACTCTAATA GAGTTAGTCG TAGTTATTGT CGTGCTTGGC
ATTCTTGCTG TCACTGCCGC ACCACGCTTT TTAAACCTTC AAAGTGATGC GCGTGAAGCG
CGTTTAGAAG GCATGAAGGG CGCGATTGCA TCAGCGCTCG GTGTCGGTTA TGGGAAAATG
GCGATTACAG GGTTGGAGAG CAAATCTTAC GTTTCAAACT TCGTAGACAG TGCTTTAATG
GCCGATTTAC CATTTGACGG TTGTAATATT GGTGGTTCAA AACGCTGTGT TTTCTTATAT
GGGTATCCTG ATTCTGATAG CGAGTCGATG AAATTGCTTG TGCAAGGGCT GAACGAAGAA
GGCTCAGATT GGAAAACATT TCATCACCCA GCGGGTTCAA CAACACGAGA AATGGTCATT
GCAGCAGTAG ACGAAAAAAG AGCAAGCCTG ACACAATGCG GGATTTTATA TGGACCACCG
CAGGCTCCAA ACGAAAGTTA CACCTTAAAA ATTCTTCCAT GCCCACAATA A
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| Protein sequence | MRKQTGFTLI ELVVVIVVLG ILAVTAAPRF LNLQSDAREA RLEGMKGAIA SALGVGYGKM
AITGLESKSY VSNFVDSALM ADLPFDGCNI GGSKRCVFLY GYPDSDSESM KLLVQGLNEE
GSDWKTFHHP AGSTTREMVI AAVDEKRASL TQCGILYGPP QAPNESYTLK ILPCPQ
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