Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000232 |
Symbol | |
ID | 8558537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 253542 |
End bp | 254837 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646407897 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_003287385 |
Protein GI | 262395532 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGA GTTACCCTAA CCACAGCTTG GAAAACTTTT TCTCTACCAA CCTCTCTGCG ACAGATGATG CTGTCTTTGC TGGAATTCAG GCGGAATCCG CTCGCCAAAA CGAACAAATC GAACTTATCG CTTCTGAGAA CATTGTTTCT AAAGCGGTAA TGCAAGCTCA AGGCACATGC CTAACAAACA AATACGCTGA AGGTTATCCA GGTCGTCGTT ACTACGGTGG TTGTGAGCAC GTAGATACAG TGGAAGCCAT TGCCATCGAA CGCGCGAAAA AACTTTTTAA TTGCGAATAC GCAAACGTTC AACCTCACTC AGGCGCTCAA GCAAATGGTG CGGTGAAACT GGCTCTTCTT CAACCAGGCG ACACCATTCT TGGCATGTCT TTGGACGCTG GTGGCCACCT AACGCACGGT GCACGCCCAG CACTTTCTGG TAAATGGTTT AACGCAGTTC AATACGGCGT TGATCGCGAA ACACTGGAAA TCAACTACGA CGACGTTCGT GCACTTGCAG TAGAACACAA ACCAAAGATG ATCATCGCGG GCGGCAGTGC TATTCCACGC GTTATCGATT TTGCTAAGTT CCGTGAAATC GCTGACGAAG TTGGCGCAAT TCTTATGGTC GATATGGCAC ACATTGCTGG CCTTATCGCA ACAGGTGCAC ACCCTAGCCC ATTGCCACAT GCGCATGTTG TGACAACCAC AACACACAAA ACATTGCGTG GCCCTCGCGG CGGTATGATC CTGACTAACC ACGAAGACAT CATTAAGAAA ATCAACTCCG CCGTATTCCC TGGCCTACAA GGCGGCCCAC TAATGCACGT TATCGCAGCA AAAGCGGTTG CATTTGGAGA GGCGCTTGGC CCTGAATTTA AAACTTATAT TGATTCGGTG ATCAATAACG CAAAAGTCCT AGCGGAAGTA TTGCAAACTC GCGGTTGCGA CATCGTAACT GGTGGCACAG ACACGCACCT AATGCTGGTT GACCTTCGCC CTAAAGGCTT GAAAGGCAAC AAAGCAGAAG AAGCTCTAGA ACGTGCTGGG ATCACATGTA ACAAAAATGG CATCCCATTC GATACAGAGA AGCCTATGAT TACATCGGGC ATCCGTTTAG GAACGCCTGC GGGTACAAGC CGCGGCTTTG GCGCTGAAGA ATTCAAACTC ATCGGTAATT GGATTGGTGA CGTACTGGAT GGTTTGGTGA ACAACCCAGA AGGTGACGCA GACGTTGAAA AACGCGTCCG CAAAGAAGTA AAAGAACTTT GCAGTCGCTT CCCTCTTTAC CAATAA
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Protein sequence | MNKSYPNHSL ENFFSTNLSA TDDAVFAGIQ AESARQNEQI ELIASENIVS KAVMQAQGTC LTNKYAEGYP GRRYYGGCEH VDTVEAIAIE RAKKLFNCEY ANVQPHSGAQ ANGAVKLALL QPGDTILGMS LDAGGHLTHG ARPALSGKWF NAVQYGVDRE TLEINYDDVR ALAVEHKPKM IIAGGSAIPR VIDFAKFREI ADEVGAILMV DMAHIAGLIA TGAHPSPLPH AHVVTTTTHK TLRGPRGGMI LTNHEDIIKK INSAVFPGLQ GGPLMHVIAA KAVAFGEALG PEFKTYIDSV INNAKVLAEV LQTRGCDIVT GGTDTHLMLV DLRPKGLKGN KAEEALERAG ITCNKNGIPF DTEKPMITSG IRLGTPAGTS RGFGAEEFKL IGNWIGDVLD GLVNNPEGDA DVEKRVRKEV KELCSRFPLY Q
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