Gene VEA_000232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000232 
Symbol 
ID8558537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp253542 
End bp254837 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content48% 
IMG OID646407897 
Productserine hydroxymethyltransferase 
Protein accessionYP_003287385 
Protein GI262395532 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGA GTTACCCTAA CCACAGCTTG GAAAACTTTT TCTCTACCAA CCTCTCTGCG 
ACAGATGATG CTGTCTTTGC TGGAATTCAG GCGGAATCCG CTCGCCAAAA CGAACAAATC
GAACTTATCG CTTCTGAGAA CATTGTTTCT AAAGCGGTAA TGCAAGCTCA AGGCACATGC
CTAACAAACA AATACGCTGA AGGTTATCCA GGTCGTCGTT ACTACGGTGG TTGTGAGCAC
GTAGATACAG TGGAAGCCAT TGCCATCGAA CGCGCGAAAA AACTTTTTAA TTGCGAATAC
GCAAACGTTC AACCTCACTC AGGCGCTCAA GCAAATGGTG CGGTGAAACT GGCTCTTCTT
CAACCAGGCG ACACCATTCT TGGCATGTCT TTGGACGCTG GTGGCCACCT AACGCACGGT
GCACGCCCAG CACTTTCTGG TAAATGGTTT AACGCAGTTC AATACGGCGT TGATCGCGAA
ACACTGGAAA TCAACTACGA CGACGTTCGT GCACTTGCAG TAGAACACAA ACCAAAGATG
ATCATCGCGG GCGGCAGTGC TATTCCACGC GTTATCGATT TTGCTAAGTT CCGTGAAATC
GCTGACGAAG TTGGCGCAAT TCTTATGGTC GATATGGCAC ACATTGCTGG CCTTATCGCA
ACAGGTGCAC ACCCTAGCCC ATTGCCACAT GCGCATGTTG TGACAACCAC AACACACAAA
ACATTGCGTG GCCCTCGCGG CGGTATGATC CTGACTAACC ACGAAGACAT CATTAAGAAA
ATCAACTCCG CCGTATTCCC TGGCCTACAA GGCGGCCCAC TAATGCACGT TATCGCAGCA
AAAGCGGTTG CATTTGGAGA GGCGCTTGGC CCTGAATTTA AAACTTATAT TGATTCGGTG
ATCAATAACG CAAAAGTCCT AGCGGAAGTA TTGCAAACTC GCGGTTGCGA CATCGTAACT
GGTGGCACAG ACACGCACCT AATGCTGGTT GACCTTCGCC CTAAAGGCTT GAAAGGCAAC
AAAGCAGAAG AAGCTCTAGA ACGTGCTGGG ATCACATGTA ACAAAAATGG CATCCCATTC
GATACAGAGA AGCCTATGAT TACATCGGGC ATCCGTTTAG GAACGCCTGC GGGTACAAGC
CGCGGCTTTG GCGCTGAAGA ATTCAAACTC ATCGGTAATT GGATTGGTGA CGTACTGGAT
GGTTTGGTGA ACAACCCAGA AGGTGACGCA GACGTTGAAA AACGCGTCCG CAAAGAAGTA
AAAGAACTTT GCAGTCGCTT CCCTCTTTAC CAATAA
 
Protein sequence
MNKSYPNHSL ENFFSTNLSA TDDAVFAGIQ AESARQNEQI ELIASENIVS KAVMQAQGTC 
LTNKYAEGYP GRRYYGGCEH VDTVEAIAIE RAKKLFNCEY ANVQPHSGAQ ANGAVKLALL
QPGDTILGMS LDAGGHLTHG ARPALSGKWF NAVQYGVDRE TLEINYDDVR ALAVEHKPKM
IIAGGSAIPR VIDFAKFREI ADEVGAILMV DMAHIAGLIA TGAHPSPLPH AHVVTTTTHK
TLRGPRGGMI LTNHEDIIKK INSAVFPGLQ GGPLMHVIAA KAVAFGEALG PEFKTYIDSV
INNAKVLAEV LQTRGCDIVT GGTDTHLMLV DLRPKGLKGN KAEEALERAG ITCNKNGIPF
DTEKPMITSG IRLGTPAGTS RGFGAEEFKL IGNWIGDVLD GLVNNPEGDA DVEKRVRKEV
KELCSRFPLY Q