Gene VEA_000229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000229 
Symbol 
ID8558534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand+ 
Start bp250302 
End bp251030 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content44% 
IMG OID646407894 
Producttranscriptional regulator 
Protein accessionYP_003287382 
Protein GI262395529 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAA GAAAGCAGGG GCGTAGAAGT GCTGAAGCCG CAGAACAAAC TAAGTGTCTG 
ATCCTTAAGG TGGCAGCAGA TATGTTTTGT GAACTTGGTT ACGAGCGTGT CTCACTGCGC 
AATATCAGTG AAAAGGCTGG TGTTTCACAT AGTTTGATCC GTCACCACTT CGGCAGCAAA 
GAGAAGATTT GGCAAGCGGT TAGCGACGCG ATGGATGAAT TCATGCAGTG CTATATGGCT 
GAATTAATCA ATGAGATGCC TGAGAACACA CCTTCGAATA GAAAAATTTA TCTGTTCATG 
GTTCGCATGC TGGCATTTGC GCTCGTTAAT CCTCACCCAG TACAGATGAT CGCTGATGCT 
ATTCGCCAAG GCGATGATGG TGCCCTGCTG CAGTATTTCT TAAAGTCAAA AGATGAGTTT 
GCTGCGATAT TTACCGGAAT TTTTGAGCAG TACAACAGTG AAAACCCTAA CGCCCAATTT 
GATCAGTGGG AATCAAAGTG GCAGATGTTG ATTTTTGCAC ATGGTGCAAT CAGTCTTACT 
CCGATGATGC AAGAGACATG GCCTGACATC GCTGATAATC GCGAAAAAAT GCTGATCAAA 
CATTGGGAGC TGTTCAATAC GATCATGGCG TCTCAGTTTG GGATTGCAAA AGAAGACATG 
ATTCATCCGG AAAAACTTGA AGATATCGTT ATCGACATGT GTTGTACAAT CGACAAAGCG 
GTCGGATAA
 
Protein sequence
MNERKQGRRS AEAAEQTKCL ILKVAADMFC ELGYERVSLR NISEKAGVSH SLIRHHFGSK 
EKIWQAVSDA MDEFMQCYMA ELINEMPENT PSNRKIYLFM VRMLAFALVN PHPVQMIADA 
IRQGDDGALL QYFLKSKDEF AAIFTGIFEQ YNSENPNAQF DQWESKWQML IFAHGAISLT 
PMMQETWPDI ADNREKMLIK HWELFNTIMA SQFGIAKEDM IHPEKLEDIV IDMCCTIDKA 
VG