| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000227 |
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| Symbol | |
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| ID | 8558532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 248006 |
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| End bp | 249067 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407892 |
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| Product | periplasmic linker protein |
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| Protein accession | YP_003287380 |
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| Protein GI | 262395527 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAT CTCTACTTAC GATCTCTGCA ATTGCGCTTG CAGTTTTAAC GGGTTGCAAA
AATGAAAACC AAGCTGTCGT CGAGCAGCCG CTTTTTGTGT CGACTATCTC TGTGGATGCG
CCGGTACAAA GCCAATATCG AGCTTTTAAA GGAATAGTTG TACCAGCAGA GCAAACGCCT
ATGGCATTCC GCCGCGCGGG AGAAATTCAA CACGTGTTGG TTAAAGCGGG CGACGTTGTT
AAGCAAGGCC AAATGATCGC AAAGCTGGAT GACAGCAAAG AAAAGCAAGC CGTAAATGAC
GCAGAAGCGC AATATACACT GGCGATTCGT CAGCTCAAAC GCGGCGAAGA CCTACACGCA
CGTCAGATGA TCTCAAAAGC CGAGCTTGAT GAGCTAACGG CTAATAAAGA GTTGGCAGAG
GCTAATTTCT ATAACGCCAC CAATCAATTG AACTACACCC GTTTATTCGC CCCGTTTGCC
GGTAAAGTGT CGGACGTTTT CAAAGAGCGT TTTGAACGTG TGGCAGTTGG AGAGCCGGTG
TTGAACCTAT ACCAAAACGA TTTGGTGTAC GTGCGTATTG AGCTTTCCGA TAATGTTCTC
GCTATGGTGG ACCCAAATTC AGACAACATG AGTTACAAGC CTAGAGCAAC CTTCTCCGGC
ATTAATGACA CATTTGCTTT GGACTATTTA GAGCACACAA GTGAGCCTAA CTCCGAAACT
CAAACTTACG AAATGTATTT GACGATGCCA CAGCCAAAAC CAGAGATATT GCCGGGAACC
AGCGTCAGTG TTCTGGTCGA TATGGTGAAA GCGGGGATTA CCTCCATCGA TGGTTACAGT
ATTCCAGTGA CGGCGCTTCA AGCGGGCAGC GAAGAGAATG AGTTCTTTGT ATGGAAAAAA
GAGGGTGACG TTGTCACCCG GGTGCCTGTG ATGATTTCCC AAGTGAATGG CAACGGAGCC
ATTGTGTCGT CAGGAGTTAA GCAAGGCGAC GTTCTGATTA ATTCAAACCT ACGTAAATTA
CGTGAAGGGA AACATGTGGA TGTTGTGGAG AATAAACAAT AA
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| Protein sequence | MKRSLLTISA IALAVLTGCK NENQAVVEQP LFVSTISVDA PVQSQYRAFK GIVVPAEQTP
MAFRRAGEIQ HVLVKAGDVV KQGQMIAKLD DSKEKQAVND AEAQYTLAIR QLKRGEDLHA
RQMISKAELD ELTANKELAE ANFYNATNQL NYTRLFAPFA GKVSDVFKER FERVAVGEPV
LNLYQNDLVY VRIELSDNVL AMVDPNSDNM SYKPRATFSG INDTFALDYL EHTSEPNSET
QTYEMYLTMP QPKPEILPGT SVSVLVDMVK AGITSIDGYS IPVTALQAGS EENEFFVWKK
EGDVVTRVPV MISQVNGNGA IVSSGVKQGD VLINSNLRKL REGKHVDVVE NKQ
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