| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000226 |
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| Symbol | |
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| ID | 8558531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 244947 |
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| End bp | 248006 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407891 |
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| Product | transporter AcrB/D/F family |
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| Protein accession | YP_003287379 |
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| Protein GI | 262395526 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.486029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTG CTGAGTACTC AATAAAAAAT AAAGTCATCA GCTGGTTGTT TATTATTATC
CTTGCTGTTG GTGGTTTAAC GTCGTTTTTG GAGCTTGGAC GACTAGAAGA CCCGGCATTT
ACGATTAAAG ATGCCATGAT CATTTCAACA TACCCTGGCG CGACGTCGAA AGAGGTTGAA
GAAGAGCTGA CGTATCCTTT AGAAAAAGAG ATTCGAAAAC TCCCTTATAT AGACAAAATT
ACCTCTACGT CTTCTGATGG TATGTCTCAA ATCACGGTCA GTATGGAAAT GGACTATGGT
CCTGATGAAC TGCCGCAAAT TTGGGATGAA ATGCGCCGTA AAATTAATGA CTTGCGACCA
ACTTTGCCTC AGGGCGTACA ATCTTTGCAG ATCATTGATG ATTTCGGTGA CGTTTATGGC
GTGATGCTGA TGCTCACTGG CGATGACTAC GATTATGTCG AGCTAAAACG CTATGCTGAT
TACCTGACTC GTGAAATCGA GCTGGTTGAT GGCGTAGGAA AAGTGGATAT CACGGGCGAT
CAGCAAGAAA TGCTGTTTGT TGAGATCTCT CTTGACCGCC TTGCCGCGCT GAACTTAGAC
ATGAATGTGG TTGCGAGCTT GTTGAACCAA CAAAATAATG TAGTTTCAGC AGGGGAAGTG
ATGGTCAATG GCGAAAGCCT TGTCATTCGT CCAAGTGGTA CCTTAAACAC CGTAGAAGCG
CTAGAAAACT TGATCATTCA TGGTCGTGAC ACTGGGAACC TAATTCGTCT AAAAGACGTA
GCAACGATTT CTCGTGGTAT CCAAGAGAAG CCAAGCAACG TCGTACTCTT TAACGGTCAA
AAAGCAATTA ATATCGGTAT CTCGTTTGCG TCAGGTGTGA ACGTGGTTGA GGTTGGCGAA
CGTTTGGATG CGAAGCTTGC GAGCCTTGAG TCTATCAAGC CTGCTGGCAT CGATATGAAC
TACTTTTACA ACCAAGCCAA TGAAGTGGAT GAGTCCGTTA AAGCGTTTGT GATTAGCCTA
GCAGAGGCTG TGGCGATCGT TATCATCGTT CTGCTGTTTA CGATGGGCTT ACGCAGTGGT
GTCATCATTG GCGTCGTGCT GTTATTGACG GTGTTCGGTA CCTTCATCTT GATGAACTAC
AACAATATCG AGCTGCACCG TATTTCTCTT GGCGCGTTAA TTATTGCTCT GGGTATGCTG
GTTGATAACG CGATTGTGGT CGTGGAAGGC ATCTTGGTTG GCCTAAAAAA AGGGCGCACT
AAAGTTCAAG CGGCCGTCGA TATTGTAAAG CAAACACAAT GGCCTTTGCT TGGCGCAACC
ATCATTGCGA TTACGGCTTT TGCACCTATC GGTTTGTCGC AAGATGCAAC GGGTGAATTC
ATGGGCTCTC TATTCTGGGT GCTGTGTTTC TCACTATTTT TGAGCTGGAT TACCGCTATT
ACGCTGACGC CATTCCTCGC AGATCTATTG CTGAAAGAAG AGGACAAGGG CCAAGATACT
AACGAAGAAG ATCCCTACAA AGGTTGGCTG TTTGTTGTAT TTGGCGCATC GCTGAAATTC
GCACTGCGAT TCCGTTGGCT AACGGTTGCT GGCATGGTCG CGCTATTAGT GGGTGCTGTC
GTGGCATTTG GTAATGTAAA ACAGCAGTTC TTCCCACCAT CGAACACGCC GATGTTTTAC
GTTGATATGT GGATGCCAGA AGGTACGGAT ATCCGCGAAA CGATCAAAAA AGCCGAAGAA
GTGGAAAGCT ACATTCGTCA GCAAGACGAT ATTGACTTTG TTTCTGCTTC AATTGGGCAG
GGTTTGCAGC GTTTCGCTCT GACTTACCAG CCAGAGAAAA GCTATGAAGC GTACGCCCAG
TTCCAAGTTC GCGCCACTGA TCGTGAGAGC ATGTTCGGTT TGTTGCACAA GTTAGACGCT
AACCTTGCGA AGACGTTTGA TGCACCGACA TTTCAATTTA AATTGATGGA ATTTGGCCCT
TCACCAGCGT CTAAGATCGA AGCGCGTATT ACTGGTCCCG ATCCACAAGT TTTACGTGAT
TTAGCGGTGC AAGTTGAAGA CATCCTTCAT ACCGACCCTG GTGCCCGAAA CATTCGTCAC
GATTGGCGAG AGCGTACTAA GGAGCTTGTG CCTGTTTTCA ATGAGTCTAA AGCTCGTCGC
TTGGGCATTT CGAAAGAAGA TCTTTCAAGC ACACTGCAAA TGGCGTTTGG TGGTAGCACG
TTGGGTTACT TACGTGATGG TACACACACT TTGCCAATTA TGACGCGCCT TCCTGAAGAA
GAACGCGTGG ACTTTGAATC ACTACAAAAC GTGACCATTT GGAGCCCATC ACTGCAAACG
TATATTCCGG TCGACCAAGT GATTGATGGC GTTAAATTGG ATTGGAGCGA GCCGCTAATT
CAGCGTCGTG ACCGCAAGCG CACGTTAACT GTGCTCGCTG ACCACGATGT GTTGAGCGAC
GACACGGCGG CAAGCTTGTT TGCGCGTGTG CAGCCTAAAG TGATGGCACT GCATATTCCA
GAAGGTTACG AAATCACATG GGGTGGTGAG TATGAATCAT CGAAAGATGC GCAAGAAGGT
CTATTTGGTT CGTTGCCGAT GGGTTACTTG TTGATGTTCA TCATTACTAT TTTGCTGTTT
AACTCAATTA AAAAGCCGTT GGTCATTTGG TTCACCGTGC CGTTGGCGAT CATTGGTGTT
GCCTTTGGTT TACTTACCAC TAATATGCCG TTCAGCTTTA CAGCATTCCT TGGTTTGCTG
AGCCTAAGTG GCATGATTTT GAAAAACGGT ATTGTGTTGC TTGATCAAAT TAACCTTGAG
TTGGAATCAG GGAAAGAGCC TTACCTCGCG ATTGTCGATA GTGCGATCAG TCGTGTTCGT
CCGGTAAGTA TGGCTGCTCT GACGACCATC TTGGGGATGA TTCCACTCGT CTTCGATGCC
TTCTTTGGAT CGATGGCAAT AACGATTATG GCAGGTCTTG GTTTTGCTAC AGTACTGACA
CTGATTGTAG TGCCAGTAAT GTTTGCGATT CTGTTTAGGG TAAAACCGAC CACTGCATAG
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| Protein sequence | MNIAEYSIKN KVISWLFIII LAVGGLTSFL ELGRLEDPAF TIKDAMIIST YPGATSKEVE
EELTYPLEKE IRKLPYIDKI TSTSSDGMSQ ITVSMEMDYG PDELPQIWDE MRRKINDLRP
TLPQGVQSLQ IIDDFGDVYG VMLMLTGDDY DYVELKRYAD YLTREIELVD GVGKVDITGD
QQEMLFVEIS LDRLAALNLD MNVVASLLNQ QNNVVSAGEV MVNGESLVIR PSGTLNTVEA
LENLIIHGRD TGNLIRLKDV ATISRGIQEK PSNVVLFNGQ KAINIGISFA SGVNVVEVGE
RLDAKLASLE SIKPAGIDMN YFYNQANEVD ESVKAFVISL AEAVAIVIIV LLFTMGLRSG
VIIGVVLLLT VFGTFILMNY NNIELHRISL GALIIALGML VDNAIVVVEG ILVGLKKGRT
KVQAAVDIVK QTQWPLLGAT IIAITAFAPI GLSQDATGEF MGSLFWVLCF SLFLSWITAI
TLTPFLADLL LKEEDKGQDT NEEDPYKGWL FVVFGASLKF ALRFRWLTVA GMVALLVGAV
VAFGNVKQQF FPPSNTPMFY VDMWMPEGTD IRETIKKAEE VESYIRQQDD IDFVSASIGQ
GLQRFALTYQ PEKSYEAYAQ FQVRATDRES MFGLLHKLDA NLAKTFDAPT FQFKLMEFGP
SPASKIEARI TGPDPQVLRD LAVQVEDILH TDPGARNIRH DWRERTKELV PVFNESKARR
LGISKEDLSS TLQMAFGGST LGYLRDGTHT LPIMTRLPEE ERVDFESLQN VTIWSPSLQT
YIPVDQVIDG VKLDWSEPLI QRRDRKRTLT VLADHDVLSD DTAASLFARV QPKVMALHIP
EGYEITWGGE YESSKDAQEG LFGSLPMGYL LMFIITILLF NSIKKPLVIW FTVPLAIIGV
AFGLLTTNMP FSFTAFLGLL SLSGMILKNG IVLLDQINLE LESGKEPYLA IVDSAISRVR
PVSMAALTTI LGMIPLVFDA FFGSMAITIM AGLGFATVLT LIVVPVMFAI LFRVKPTTA
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