| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000217 |
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| Symbol | |
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| ID | 8558522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 235090 |
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| End bp | 236010 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407882 |
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| Product | amino acid ABC transporter permease protein |
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| Protein accession | YP_003287370 |
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| Protein GI | 262395517 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.968139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGCGAAC AAACCACCAC TCGCACAGTA TCCACTAATT CCAACACAGG TTCCTTTCTA
TCGCGATTAA ACACGCTAGA TTGGTTACTG CTTATTATCT GTGGTATTGG TGGCGTTTGG
CTGTACCATC GGTCCGCTGT TGGTGTGCAT TATTTGTGGC AGTGGAAAGA GGCGCTTGAA
TTACTTTTCA CGCCAAGAGC CGATGGTGGT TTGCCCTACT TCTTCCAAGG TTTGATTTCG
ACGTTAAGGC TCAGTATTTG GGGCATCAGC TTCGCGTTAG TGCTTGGCAC TTTGTTAGGC
TTAGCACGCT TCTCTCGCTC CGTTTGGTTG CGCACACCTG CAAACACATT TATCCAGTTG
GTAAGAAACA TCCCACCGTT GGTTTTTGTT TTTATTTTTT ACTTTTTCAT TTCTAACCAG
TTTATCCCGT TACTCGGTTT GGAAGATCTT CTACGAAACT ATAACGGTGA ACCAAATGCG
CTACAGAGCT TTCTTTTTGG GCCTTATAAC CTTTGGGAAA ATCTTACCTC TGGCGTGTTA
TGCGTCGGCC TACTCTCTTC TGCCTACGTT GCAGAAGTGG TGCGTGCAGG TTTACAAAGT
ATCGACCAAG GACAGTGGGA AGCGGCGGAT TCATTGGGCT TGTCTCGATG GGTGAAGTAC
CGATTCGTTA TCGCGCCACA GGTGCTTAAA GCAATAACAC CTGCACTTGC CGGTCAAACC
ATCTCTTTGG TGAAAGACAC CTCTATCGTT TCGCTAATTT CTATACAAGA AATGACTTTC
GTTGGGACCG AAATGGCAAA TTCATCAGGC TATATCTTTG AAATTTGGCT CATTGTCGGC
ATTGCTTACT TTTTGATTTG TTTTGGGTTG TCACTTATTT TTCGCCACAT TGAAGCAAAA
TCGGAATCCA TTTCAAATTA A
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| Protein sequence | MGEQTTTRTV STNSNTGSFL SRLNTLDWLL LIICGIGGVW LYHRSAVGVH YLWQWKEALE
LLFTPRADGG LPYFFQGLIS TLRLSIWGIS FALVLGTLLG LARFSRSVWL RTPANTFIQL
VRNIPPLVFV FIFYFFISNQ FIPLLGLEDL LRNYNGEPNA LQSFLFGPYN LWENLTSGVL
CVGLLSSAYV AEVVRAGLQS IDQGQWEAAD SLGLSRWVKY RFVIAPQVLK AITPALAGQT
ISLVKDTSIV SLISIQEMTF VGTEMANSSG YIFEIWLIVG IAYFLICFGL SLIFRHIEAK
SESISN
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