| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000215 |
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| Symbol | |
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| ID | 8558520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 233383 |
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| End bp | 234180 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407880 |
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| Product | amino acid ABC transporter permease protein |
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| Protein accession | YP_003287368 |
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| Protein GI | 262395515 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGTTC GCGTAATCAA ACCTGTGCTT CAAGCTTTAC TACAAATGAC GCTCCTCTTC
ATCGCGATTG TGTGGGTGTT AGACTCTGGT GCCGATGCTA TGGGCTATCA ATGGCAATGG
GAACGCGTAC CTGATTACAT AGCTTTTTAT GAAGATGGCG AATGGTGGCC CGCCGAACTT
ATCGATGGGC TATTGGTCAC GCTTAACATC TCGGCCATTA GTCTATTCTT CACCTTAGTG
TTGGGGTTGG TCACCGCATT ACTAAGGCTT AGCGATTCGA AAGTCGGCAA TGTTATTGGC
GCCACTTATG TCGAGGTAAT ACGTAACACG CCGTTGTTGG TGCAAATCTA TTTGCTCTAC
TTCGTGTTTG GCCCCGTGAT TGGTTTGGAC CGATTCAGCA CCGCCGTTTT GGCTTTATCC
CTTTTCCAAG GTGCTTACAC TGCAGAAATA CTCCGTGCAG GTTTAAACAG TATTCCTAAA
GGGCAATTCG AAGCAGCACA AACTCTCGGG CTGTCGCCGT TTTACACCTA CAAAGACGTG
ATTTTGCCTC AGGTTTTACA GCGCACATTA CCGCCATTAA CCAATGAAGT GGTTTCTTTG
ATCAAAAACT CTTCCATTGT AAGCGTGATG GCGATTTTTG ATTTAACAAC ACAGGCACGC
AACATCGTCT CTGAGACGGC GATGCCGTTT GAAATTTGGT TTACTGTGGC AGCAATTTAT
CTTGCTCTCA CTCTATCACT TTCTGGCTTG TCTGCATGGC TAGAACACAA ACTCGGAGCC
AGTTGGCGCA AATTATAA
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| Protein sequence | MIVRVIKPVL QALLQMTLLF IAIVWVLDSG ADAMGYQWQW ERVPDYIAFY EDGEWWPAEL
IDGLLVTLNI SAISLFFTLV LGLVTALLRL SDSKVGNVIG ATYVEVIRNT PLLVQIYLLY
FVFGPVIGLD RFSTAVLALS LFQGAYTAEI LRAGLNSIPK GQFEAAQTLG LSPFYTYKDV
ILPQVLQRTL PPLTNEVVSL IKNSSIVSVM AIFDLTTQAR NIVSETAMPF EIWFTVAAIY
LALTLSLSGL SAWLEHKLGA SWRKL
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