Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000210 |
Symbol | |
ID | 8558515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 225856 |
End bp | 229020 |
Gene Length | 3165 bp |
Protein Length | 1054 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646407875 |
Product | chitodextrinase precursor |
Protein accession | YP_003287363 |
Protein GI | 262395510 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3325] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0800752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCTTA AAAACGGCAA CGCAGTGAAA AGCGTGTTCA CACTAAGCAC TCTCACCGCT TCTTGTCTTA TGGCCTTCAA TAGCTACGCA GCGGTTGACT GTGCCCCTCT AGAAACTTGG CAATCATCAA AAGTTTATAA CGGTGGTGAC CAAGTTCAAC ATGAAGGTAA TGCTTACAAA GCACGTTACT GGACGCAAAA CAGTAACCCA GCGCAATCTG GTGAGTGGGG CGAGTGGGAA ACACTTGGCG CATGTGATGG CACTGGACCG GTTGATCCAC CTCAGAATGA AGTCCCGACT GTTACTCTGA CATCGCCTTC TGCGTCGGCT TCTGTGACTG CGGGGGATGT TGTTAACCTA GCTGCAGATG CAGTAGATAC CGATGGAACC GTTAGCAAAG TAGAATTCTT TGTTGATGGC GTATTAGTTG GTCAGGCAAC GTCTGCGCCT TATGCTGCGT CATGGACAGC GACTGAAGGC CAGCACGAAT TCTCTACTAA GGCGTATGAT GATGCAGGTG CAGTGAGCAC AGCAAGTGCT GTGACGTTAA CTGTGGCACC AGCACAACCT GGTAACGAAG CGCCGACAGT GGATGTTGCG CTTTCTGCGA CTTCTATTGA CTTGGGTGGC TCCGTCACAC TGACTGCGAA TGCCGCAGAT GCGGATGGCA CCGTTGCTAA AGTTGATTTC TATGTGGCGG GCGTCCTTGC TGGCACCGCA ACAACTGCAC CATACACGCT TGATGTAATG CCTTCACAAG CTGGTTCGCT AAGTGTTTAT GCGAGAGCAA CCGATGATGC CGGAGCAACT GCAGATTCTG CACTTGCGAC GTTAACGGTA AACGGTGGCG CGGTGACATC TAACTGTCGC CCTGATGGCT TGTATCAAAC AACGGGTGTA GACGTCCCTT ACTGTTCTAT TTATGACGAA GAAGGTCGCG AGAAAATGGG CGCCGATCAC CCACGTCGTG TGATTGGTTA CTTTACTAGC TGGCGCGCAG GTGAGGACCC TCAATCTACT TACCTTGTTA AAGATATTCC TTGGGAGCAA CTTACTCACA TTAACTACGC GTTTGTGAGC ATTGGTTCTG ATGGTAAAGT AAACGTTGGT GACGTTAATG ACCCTAACAA CCCTGCTACG GGTAAAACTT GGCCTGGCGT TGAGGTAGAT CCTGCTCTTG GCTTTAAAGG TCACTTTGGT GCGCTCGCGA CTTACAAGCA AAAACATGAT GTTAAAACGT TAATCTCTAT CGGTGGTTGG GCTGAAACGG GCGGTCACTT CGATACGAAC GGCAATCGTG TAGCTGATGG TGGCTTCTAC ACCATGACGA CGAATGCGGA CGGTTCTATT AACCATGCAG GCATCGAGAA GTTCGCAACT TCAGCCGTTG AAATGATGCG TCAGTACAAG TTCGATGGTC TGGATATCGA CTATGAATAC CCGACATCAA TGGCTGGTGC TGGTAACCCT TACGACAAAG ACTTCATGGA ACCACGTCGT CAGTATCTAT GGGCGTCTTA CCAAGAGCTG ATGAAAGTAT TGCGTGAGAA ACTTGATGCG GCATCCGCGC AAGATGGCAT TCATTATATG CTGACTATCG CAGCACCATC TTCAGGTTAC CTACTGCGTG GTATGGAAAC CTTCGATGTA ACTAAGTACC TAGACTACGT AAACATCATG TCTTACGACT TGCATGGGGC TTGGAATGAT CACGTTGGTC ACAACGCGGC ATTATTCGAT ACAGGTAAAG ACTCGGAGCT AGCGCAGTGG AACGTATACG GCACTGCTGC ATACGGTGGT ATCGGTTACT TGAACACAGA CTGGGCTTAC CATTACTTCC GTGGTTCTAT GCCTGCAGGT CGTATCAACA TTGGTGTTCC TTACTACACC CGTGGTTGGC AAGGTGTTAC TGGTGGTGAA AATGGTCTGT GGGGCCGAGC AGCACTGCCA AACCAAGCTG AGTGTCAACC AGGTACCGGT GAAGGTGAGA AGAACAACTG TGGTCACGGC GCTATTGGTA TCGACAACAT GTGGCACGAT ACCGACCCTA AAGGCAACGA AATGGGCGCT GGCTCTAACC CAATGTGGCA TGCGAAGAAC CTAGAAAATG GTATCTGGGG CTCATACGCA GCCGCTTACG GTCTTGATCC AGTTAACGAT CCTTCGGATA AGTTTGTTGG TACATATACA CGTCATTACG ATAGCGTTGC TGTAGCGCCT TGGTTGTGGA ACGCAGAGAA GAGCGTGTTC CTATCTACGG AAGATAAAGC TTCTATCGAA GTGAAAGCTG ATTACGTTAT CGATAAAGAA ATCGGCGGTA TTATGTTCTG GGAACTGGCA GGTGACTACA ACTGTTACGT ACTGGATGCA AATGGTAATC GTACGGCAGT AGATGCAACT GAACAAGCTT GTGCAGCTGG TAATGGTGAG TACCACATGG GTAACACTAT GACCAAAGCT ATCTACGACA AGTTTAAGTC TGCAACACCT TACGGCAATA AAGTTGCGAC GGGTCCAACA CCAACAGAAG CGGTAGACAT TACAGTCAGC GTTGGCGGCT TTAAGGTTGG CGACCAAAAC TACCCAATTA ATCCGAAGAT CACGTTTACG AACAACACTG GTCAAGCGAT CCCTGGTGGT ACTGAATTCC AGTTTGATAT CCCAGTATCA GCTCCTGATA ATGCGAAAGA TCAATCTGGT GGCGGTTTGA AAGTCATTGC TTCTGGACAT ACTCGTGCAA ACAACATCGG TGGCTTAGAT GGCGTAATGC ACCGCGTATC GTTCTCTCTA CCTGCTTGGA AAGATTTACC AGCGGGCGGT ACTTACGAGC TTGATATGGT TTACTACCTA CCAATCTCTG GTCCGGCTAA CTACTCAGTG ATTTCTGGTG GTAAAGAGTT TGCGTTCAAG TTTGAACAGC CAGAACTGCC AATTGGTGAC CTAAATGCAG GCTCGGGTGA TGGTGGTACT ACTGAACCAG GTACGTGTGA TACGACAGGT TTAGTGACAT ACCCAGCTCT ACCACAAACG GATTGGGCTG GTAACCCAAG CCACGCAAAC CAGGGTGATA AGATCATCCA CAACGGTGTG GTTTACCAAG CGAACTGGTG GACAGCGGCT GAGCCGGGCA CAGATGGTAG CTGGTCAACG GTATGTAACA TCTAA
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Protein sequence | MHLKNGNAVK SVFTLSTLTA SCLMAFNSYA AVDCAPLETW QSSKVYNGGD QVQHEGNAYK ARYWTQNSNP AQSGEWGEWE TLGACDGTGP VDPPQNEVPT VTLTSPSASA SVTAGDVVNL AADAVDTDGT VSKVEFFVDG VLVGQATSAP YAASWTATEG QHEFSTKAYD DAGAVSTASA VTLTVAPAQP GNEAPTVDVA LSATSIDLGG SVTLTANAAD ADGTVAKVDF YVAGVLAGTA TTAPYTLDVM PSQAGSLSVY ARATDDAGAT ADSALATLTV NGGAVTSNCR PDGLYQTTGV DVPYCSIYDE EGREKMGADH PRRVIGYFTS WRAGEDPQST YLVKDIPWEQ LTHINYAFVS IGSDGKVNVG DVNDPNNPAT GKTWPGVEVD PALGFKGHFG ALATYKQKHD VKTLISIGGW AETGGHFDTN GNRVADGGFY TMTTNADGSI NHAGIEKFAT SAVEMMRQYK FDGLDIDYEY PTSMAGAGNP YDKDFMEPRR QYLWASYQEL MKVLREKLDA ASAQDGIHYM LTIAAPSSGY LLRGMETFDV TKYLDYVNIM SYDLHGAWND HVGHNAALFD TGKDSELAQW NVYGTAAYGG IGYLNTDWAY HYFRGSMPAG RINIGVPYYT RGWQGVTGGE NGLWGRAALP NQAECQPGTG EGEKNNCGHG AIGIDNMWHD TDPKGNEMGA GSNPMWHAKN LENGIWGSYA AAYGLDPVND PSDKFVGTYT RHYDSVAVAP WLWNAEKSVF LSTEDKASIE VKADYVIDKE IGGIMFWELA GDYNCYVLDA NGNRTAVDAT EQACAAGNGE YHMGNTMTKA IYDKFKSATP YGNKVATGPT PTEAVDITVS VGGFKVGDQN YPINPKITFT NNTGQAIPGG TEFQFDIPVS APDNAKDQSG GGLKVIASGH TRANNIGGLD GVMHRVSFSL PAWKDLPAGG TYELDMVYYL PISGPANYSV ISGGKEFAFK FEQPELPIGD LNAGSGDGGT TEPGTCDTTG LVTYPALPQT DWAGNPSHAN QGDKIIHNGV VYQANWWTAA EPGTDGSWST VCNI
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