| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000198 |
|---|
| Symbol | |
|---|
| ID | 8558503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 213340 |
|---|
| End bp | 214128 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 646407863 |
|---|
| Product | EAL domain protein |
|---|
| Protein accession | YP_003287351 |
|---|
| Protein GI | 262395498 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000396049 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGCA CCTCGCAACT CCTTAGTTGC ATCCGCAAAC AAGCCGACGG GCAATATATT
GCGAAATACG CAAAGCTCAC TCTTCGAAGT GTCTTTCAAC CTATATATAA AAAAGATATT
TCTATCGTTG GCCTTGAGGC ACTAGTAAGA ATTACCAATG CTAATGGCAC CATGATCAGG
CCAGATCAGT TTTTCCAATC AAAAACCATT GCCGCTCAAG ACCTACTCAA TGTCGAACGC
TTAAGTCGCC TAATTCATAT CAAAAACTTT GCCCAATCTC ACTTTCACAA TAAACAACTG
TTTCTTAATG TATTACCAGA AGCAGCAAAA ATACTAGCCA GAGACATCAC GTACAATAGG
CTGCTAAAAC AAACCATTTA TCAATCTCAT TTAGTAAATG AACAAATCGT CATGGAGTTG
CTTGAGTTGA ACGTAGAAGA CGAGTCCTCG TTGTCGCAAG CAGCTCGTGA ATTAAGCCAA
GGCGGGTTTA AATTGGCGAT CGACGATTAT GGCGTCAATG CCTCAACAAT TGAACGAGTG
AAAGGCGTTC GTCCAGACAT AATAAAGATG GATCGCTCGT TAATGCTGAG ATACGAAAAT
GGTGACTGGA AAGCTCTAGT CGATGCATTA TCACTAGCAA GAACGTTGCG CTCTAAAACC
GTTATCGAAG GAATTGAAAC CGAGCATCAA CTTAACTTAA TGAAAAAACT CGGTTTCGAT
ATGTATCAAG GATACCTACT CGCTATCCCG CAAACGTTAG ACGTTTATGA AGAGGCAAAA
ACAGCCTGA
|
|---|
| Protein sequence | MMSTSQLLSC IRKQADGQYI AKYAKLTLRS VFQPIYKKDI SIVGLEALVR ITNANGTMIR
PDQFFQSKTI AAQDLLNVER LSRLIHIKNF AQSHFHNKQL FLNVLPEAAK ILARDITYNR
LLKQTIYQSH LVNEQIVMEL LELNVEDESS LSQAARELSQ GGFKLAIDDY GVNASTIERV
KGVRPDIIKM DRSLMLRYEN GDWKALVDAL SLARTLRSKT VIEGIETEHQ LNLMKKLGFD
MYQGYLLAIP QTLDVYEEAK TA
|
|---|
| |