Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000182 |
Symbol | |
ID | 8558487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 194663 |
End bp | 195745 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646407847 |
Product | Zn-dependent protease |
Protein accession | YP_003287335 |
Protein GI | 262395482 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.273834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAATTAC TGAATGTTGA ATTTTTAGGT CGTTCGTTAA GGCTCGAAGG ATCGATGGCT GGTTGGCAGC AGTTATATTG GGATAACACC TTGGTGTCCC AAATAGATGC CAGTGATAAT GTTGCAGACA CTTGCCTTCA CCAGTTTAGA CTCTCTGCAG GGGAGGAAGT CCTGGTATGC CATTTGGAGT GTTCATTAAC ATGGCAACCG TTTGAATTGA GTTACAAGGT CACAATTAAC GATGAGCTTA TTAGCGAAGG TTGCCGAAAT GAAAAAGACA TCGAACGCCA AGTACCAGAA GTTGAGCCGC CAACGGAAAA GCGTTTAAGT GTGATAGGGC TAGTATCACT TGGAATGAAA GCACTCAAGA GTGCGAAAGT AATCAAAGTG GCGCTAGCAT CTGCAAGTCT TGCTGCATAT TCTTGGCTAT TTTCTATCGA GTTCGCGTTA GCTTTGATCG CCTGTTTAGT TTTCCATGAG TATGGCCATA TTAGAGCGAT GAAGTACTTT GGAATGAAGA CCAAGGGCAT CTATTTGATT CCATTTCTTG GCGGTTTAGC GCTGAGTGAT GAAAAGATCA ACACACGCTG GCAAGATGTG GTTATCTCGA TTATGGGACC ATTTTTTGGT TTAGTTCTTA GCATCGCGTT TACTTTGCTT TATTGGATGA CTGGAGAGGT GCTCTTCGCT GGCCTAGCAG TGTTTAACGC GTTACTAAAC CTGTTTAATC TGTTGCCTAT TCTGCCACTA GATGGTGGTC ATGTACTCAA AAGTATTACC TTCTCGATGA ACACTTGGGT TGGATTAGTC GGCAGTATAG CTGCTGCCTT TTTGGGTATT TTTATCAGCT ATTCTTTCGG GCTGACGTTG CTAGGGTTTT TATTGTTAAT GGGGATGCTA GAAGTGGTCA TGGAATGGAG AGGTCGACAT CATAGTCATT TATTGCCGTT AACCCGTTAC GGACAACTCT TCTCACTTGC TTGGTACTTG GTTTCTGTCG GTGGTTTTGT CGCTATCATT TGGTATTTTG CTACCCTTGG AGATAGCCTG TTGAGCTTGC CACTACAGAT ACTGGGTACT TAA
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Protein sequence | MELLNVEFLG RSLRLEGSMA GWQQLYWDNT LVSQIDASDN VADTCLHQFR LSAGEEVLVC HLECSLTWQP FELSYKVTIN DELISEGCRN EKDIERQVPE VEPPTEKRLS VIGLVSLGMK ALKSAKVIKV ALASASLAAY SWLFSIEFAL ALIACLVFHE YGHIRAMKYF GMKTKGIYLI PFLGGLALSD EKINTRWQDV VISIMGPFFG LVLSIAFTLL YWMTGEVLFA GLAVFNALLN LFNLLPILPL DGGHVLKSIT FSMNTWVGLV GSIAAAFLGI FISYSFGLTL LGFLLLMGML EVVMEWRGRH HSHLLPLTRY GQLFSLAWYL VSVGGFVAII WYFATLGDSL LSLPLQILGT
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