Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000181 |
Symbol | |
ID | 8558486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 193801 |
End bp | 194589 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646407846 |
Product | Zn-dependent protease with chaperone function |
Protein accession | YP_003287334 |
Protein GI | 262395481 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.787256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTAT GGATGAAAGC CTCTGCTCTT TTAACTATCG CGGGCTTAAC GGCATGTAGC GCATCACCGA CCGGCCGTAA TCAGATCCTG ATGTTTTCAG ATCAAGAAAT GTCATCGCTT GGCGCCAAAT CTTTCGAACA AATGAAGAAA GATATCCCAA TCAGCAAAGA TCGCAAAACG AATGCCTACG TACAATGCGT TGCCAAACAC ATCACTGACA CCATCCCTGC GCAAGCTGGA TTTAAAGATT GGGAGGTGGT TGTTTTTGAT AGTGAACAAG TCAATGCGTT TGCTCTACCT GGTGGGAAGA TCGGCGTTTA CACCGGGCTT TTAGGTGTCG CGAAAAACCA AGATCAGTTG GCAACAGTCA TTGGTCACGA AGTGGCTCAC GTCCTTGCTG ACCACAGTAA TGAACGCCTT TCACAAAGCC AGTTAGCAAA TGCGGGATTG TCTCTGGCAA ACGTTGCTAT AGGAGCTTCC GAGTACAAAC AGTATCAGCA AATGACGATG GCGGCACTTG GTGTCGGTGT CCAATACGGT GTTATTTTAC CATACGGTCG TACACAGGAA TCCGAGGCTG ATATTGTCGG GCTTGAGTTT ATGGCAAAAG CAGGCTTCGA CCCACGTCAA AGTGTCGATT TATGGAAAAA TATGAGTGCT GCATCCGGTG GTTCTCAACC GCCTGAATTC TTCTCAACTC ACCCATCGCA CAGTACGCGT ATTAAAGATT TACAAGCAAC CATAAATAAG TTGCCTGCGT ATAACGCGAA AGCGCCAAAA TGTGGCTAA
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Protein sequence | MKVWMKASAL LTIAGLTACS ASPTGRNQIL MFSDQEMSSL GAKSFEQMKK DIPISKDRKT NAYVQCVAKH ITDTIPAQAG FKDWEVVVFD SEQVNAFALP GGKIGVYTGL LGVAKNQDQL ATVIGHEVAH VLADHSNERL SQSQLANAGL SLANVAIGAS EYKQYQQMTM AALGVGVQYG VILPYGRTQE SEADIVGLEF MAKAGFDPRQ SVDLWKNMSA ASGGSQPPEF FSTHPSHSTR IKDLQATINK LPAYNAKAPK CG
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