Gene VEA_000172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000172 
Symbol 
ID8558477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp188088 
End bp188708 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content43% 
IMG OID646407837 
ProductDnaJ-related protein 
Protein accessionYP_003287325 
Protein GI262395472 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0599175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGAC AACGCACGGT CAGTAGTATT GAGACTCACG CAATAGAAAA CCCGTTGCTT 
TGGCCAATGC TAGAAATTCT TAGAAAGCAG CCTTCCGATT GGAAAGTTCA CACCTTAGCA
AGCAAGTTGA GTGAACAGGG CTACATTTCG AAATTGGATG ATTCTCCTGA TAAGGATTTA
TTCAAAAGAA ATTTCTTAAT CATGAACGCG CTATACCAAC TGCAAGAAAC GCTTTATCCA
GATGCCTGGC TGCAAGTTGA AGCGATGAAT ATCCAGCTGA TGTCTTCGTT AGAAGCTTCG
AGGCATATCG TTGATATTAA CGACCCTTTG CGTGAATATT ATCTGGATTG GCGCAACTAC
GAAGCGGACG AAGATGAAGT GCGTCGATTG TTGAATGAAT TTTGGACCAC TTATCAAAAA
TTCATTGGTG GTTCGTCTAC AGTCAGTGTG GATAAAACAA AAGCACTCTC ACTGTTTGAG
CTTAACCCTG ATGCAACACC CGCAGAAATT AGAAAGCAGT GGCGAAAACT CGCGCTTCGT
TGGCACCCAG ATAGAGAGAA TGGTGATGCA GAAAGGTTTA GAATTCTTTG CGAAGCGTGG
AATGTACTGA GAAACGAATG A
 
Protein sequence
MEGQRTVSSI ETHAIENPLL WPMLEILRKQ PSDWKVHTLA SKLSEQGYIS KLDDSPDKDL 
FKRNFLIMNA LYQLQETLYP DAWLQVEAMN IQLMSSLEAS RHIVDINDPL REYYLDWRNY
EADEDEVRRL LNEFWTTYQK FIGGSSTVSV DKTKALSLFE LNPDATPAEI RKQWRKLALR
WHPDRENGDA ERFRILCEAW NVLRNE