| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000171 |
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| Symbol | |
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| ID | 8558476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 186350 |
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| End bp | 188005 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407836 |
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| Product | isopentenyl-diphosphate delta-isomerase |
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| Protein accession | YP_003287324 |
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| Protein GI | 262395471 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3044] Predicted ATPase of the ABC class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.358983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAGT TGACTGCCAC GCTTAAGAAA ATTGAAAAGC AGAACTACCG CGCTTATCAG
CAAATCAAAG GTCAATACGA CTTCACTGAT TTCACTTTGT TCATCGATCA CGTACAAGGA
GATCCGTATG CTTCCGCGTC ACGTTTTCGT GCAACTCGCG CCTGGTCCTT GACTGGTCTG
GAATGGTTAA AAGACGAGTC CCCTGCTTTT CAACGAGCAG CACGTGATTT TATTGCGCGC
AGTTTTGAGC TGTTTGCTAA ACAAGAAAAC TCCGTATCCA TTTCATTGAA TGGCCAAACT
GTGTTGGATA GCACCGCAGT ATTGTTTACC GAGGAAGGTA TTGAACTGCG TTTTCGAGTT
AACTTGCCTG CTGAAGGTCG TTCAGTGTTG GGGAAAAAAG CCAACAACAT ACTGACTTTC
CATTTGCCTA AGTTTATCCG TCGAGCGACC TTAGAACGTG AACTCGACAA AGCAGCATTG
ATTGAGCATT GCCAAGTTGT TGAAGACCAA GACGCCCTGC GTGCACAGTT GGAAGCCAAT
AACCTAGTTG CGTTTGTCGC AAATGGCAGC ATTCTTCCTC GAATTGCTGG CAACTGTGAT
CTCCCAATGA AAGAGGCGGT TGAGTTCAAG GCCCCTGAAT CGCTGCAAGT GACTTTACAT
GCACCAAACA AAGGCCATGT CACGGGATTA GGGATTCCAA AGGGCATTAC GCTAATCGTT
GGTGGCGGTT TCCACGGTAA ATCTACCTTA CTGAATGCGA TTGAGCGTTC GATTTACGAC
CATATTCCAG GAGATGGTCG TGAATACATC GTAGCTGATG ACAAGGCAAT GAAGATCCGC
GCCGAAGATG GTCGATGCGT GCATCATTTG AACCTGTCGA ATTACATCAA CCATTTGCCA
ATGGGTAAAG ATACAGCGGA CTTTTCGACT CAAGATGCAT CAGGCTCAAC ATCACAAGCC
GCTTGGCTTC AAGAGTCTAT TGAAGCGGGT GCGAGCACGT TATTGATTGA TGAAGACACC
TCTGCGACGA ACTTCATGAT TCGAGATGAA CGTATGCAGG CATTGGTGGC AAAAGGTGAT
GAACCAATTA CCCCTCTTGT CGATCGCATT GGTCAATTGC GAGATGATCT CGATATCTCT
ACCATTATCG TTATGGGTGG TTCAGGCGAC TACTTAGACG TTGCCGACAC AGTCATTCAG
ATGCACGACT ACCAAGCGGT TGATGTGACA GAAAAAGCGA AAGAAGTGAT CGCTCAGCAC
CCTACTCAAC GTCATAACGA ATCGGAAGAA CGCTTACAAA CCTTCCCGCC TCGCGCCCTG
AATCGCGTTG CTTTGATGAA TATTCTCACT GACGGTAAAT TCCGTGTGAA TGCGAAAGGC
AAAGAGTCAC TTCGATTTGG CAAAGAGTTT ACTGACCTTA GCGCTTTGGA ACAGATTGAG
TCCGCTGATG AAGTCAACAC GATTGGCTGG TTATGGTTCC AAATCGCTCA GCTTCCAGGC
TGGTGTAATC ATCCAGCGAA AGAAATTGAA GAAATGCTGT CTGGTGAGTG GCATGCATCG
CTTCCTAAGC AAGGGGACTT AGCCAAACCA CGCACACTAG ACGTAATGGC TGCGCTTAAT
CGCATGAGAA AATCTCAGTT TAAGCCTTCA TGCTAG
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| Protein sequence | MDQLTATLKK IEKQNYRAYQ QIKGQYDFTD FTLFIDHVQG DPYASASRFR ATRAWSLTGL
EWLKDESPAF QRAARDFIAR SFELFAKQEN SVSISLNGQT VLDSTAVLFT EEGIELRFRV
NLPAEGRSVL GKKANNILTF HLPKFIRRAT LERELDKAAL IEHCQVVEDQ DALRAQLEAN
NLVAFVANGS ILPRIAGNCD LPMKEAVEFK APESLQVTLH APNKGHVTGL GIPKGITLIV
GGGFHGKSTL LNAIERSIYD HIPGDGREYI VADDKAMKIR AEDGRCVHHL NLSNYINHLP
MGKDTADFST QDASGSTSQA AWLQESIEAG ASTLLIDEDT SATNFMIRDE RMQALVAKGD
EPITPLVDRI GQLRDDLDIS TIIVMGGSGD YLDVADTVIQ MHDYQAVDVT EKAKEVIAQH
PTQRHNESEE RLQTFPPRAL NRVALMNILT DGKFRVNAKG KESLRFGKEF TDLSALEQIE
SADEVNTIGW LWFQIAQLPG WCNHPAKEIE EMLSGEWHAS LPKQGDLAKP RTLDVMAALN
RMRKSQFKPS C
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