| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000166 |
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| Symbol | |
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| ID | 8558471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 179156 |
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| End bp | 181612 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407831 |
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| Product | predicted ABC-type transport system permease component |
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| Protein accession | YP_003287319 |
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| Protein GI | 262395466 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCAG TATCATCAAG CGAAGCAACA TCGACAGAAA GAAGCAGTGC AATAAAACAC
TCGTCAAACA AAAGCCTAAT ACGTTGGAGT TTCGGCGAAA TAAGACAGGG GAACCTTTGG
CCTATTAGCG TTGCTCTTAT TCTTGTGATT GCGAGCATCT TTGCGCTTTC TGCATTAGCG
GAGCGAATGG AGCAGGTGAT CGTCAAACAG GGGAAGGATG CATTGACAGC GGATGCGGTG
TTTGTGTCTG CTAATCCTAT ACCTGACACG TTGTTAGCCT CGACTGAAAA CCTAGAACGT
TCGACGATGA CACGATTTGC CACGATGGCA TTTAGCGACA ATGGTATGCA GTTGATTTCC
GTAAGGGCAG TGGACGACAA TTACCCTTTA ATGGGAGAAC TGGTACTAGA CAACAACCCA
TCCGGTCGCG TTAAAGAGAA CCAACTCTGG CTTGATGAGC GGATTATGGC TCAACTAGAC
GTCAAGTCGG GTGACAGCGT CACTATAGGC GATGCCGATT TTACGGTTTC AGGTGCAGTG
CTGATGGAAC CTGGGTTAAG CTTTAACCCA TTTCAACAAA TGCCTTCTGC ATACATCCAT
CAAAAAGACG TTGAGAAAAC AGGAGCGATT CAAGTCGGGA GTCGAGTTCA ATACCGTCTG
TTTCTACAAG CCGATGATAA AACGCTAAAA GGCCTGCAAG AAGATACTGT TCTTTCTCCT
AGTGATCGCT GGCGCACGCA AGATACTGCC AGTCGTAGCA ATGAGGTCTT TGAACGAACG
ACGCAGTATT TGTCTCTAAC GGTTGCGATT GTCATCATTA TGGCAGCGAC AACATTGGTT
CTTACTTGCC AAAACTATGT GAATAGTCGA ACACAAACCA TTGCGATGCT AAAAAGCCTT
GGCGCAAGTC GACGATGGAT TGAAAAATGG CTGTTTATTC AAGTCACAAT CCTGCTCATT
AGCGCCAGTG TCGTTGGGTT ATTGTTGGGA AGTGGGCTGG AGTACTTGTT GCGCATTCCA
CTCAAAGACT TATTACCCGA GCCATTACCT AGTTACGGCG TCACTCCATA TTTGGTGTCG
TTTATCTCAG CGGTCCTGAT CACCGTTCCT GCCCTTGGCA TACCATTGTT GGGTTTGATT
ACAACTCCAG CCTTAGAAGT GCTACAGCAG GGCAAAGCAC AACGTTCTTG GAAGCGAATG
TTGCTCGTTC TAGTCCCCGT TGTTCCATTA CTTTTGCTTT ATGCTGATAA CACCTTAGTT
TGGATTGTTC TTATTGGTAT TGCAGTACTT TTTGTTGTGC TTGCTGCAGT GAGCGTCGCA
CTCACAAAAT TGTTTGCGCG TATTTCAACA CAACCTGCCA TGAAGCTTGC GTTGAGTCGT
ATCAACCGCA CGCCAGTAAC CAGTGGCCTG CAGTTTGGTG CTTTGGCGTT GTCTTTGATG
CTGCTATCTA TTATCTGGCT TGTGCGCAGC GATATTCTCG CGGATTGGGA GAGAACCTTA
CCTGCAGACG CACCAAATGT CTTTGCATTA AATATTGGTG ATTACGAACT CGATAGCTAC
CTAGAAACCT TAGATAAAAA TGGGGTTACA CGGTCACAAG CTTATCCAAT TATTCGTGGT
CGATTGACAG AGATTAATGG TCAAAACGTC AAAGAGATTG AATACGAAGG AGAAGGCTCT
GACGCAATAC GTCGTGAATT GAACCTTACG TGGGGAAACA GCCTGCCAGA GTATAATGAT
GTGCTTGCGG GTGAATGGAC AAATAAAGGG AGTGTCTCTG TAGAAGCCGA TGTAGCAAAT
GACTTGGGCA TCGAACTTGG TGACAAACTG CGCTTTGTTA TTAATAGCCA GAACTACGAT
GCGGTAGTAG ATACCATTCG TTATGTTGAA TGGCGTGATA TGAAGCCTAA CTTTTACTTT
ATTTTCTCAT CCGACGTTAT GGCTAATCTA CCGGGTTCTT ACCTCATCAG TTATAGAATT
GATGAGGGGA ACGAAGCACT ATTAACGTCT ATGTCTCGAT CTCACCCAAC GGTATCTGTT
TTAGATATTC GTACCATGGG CGAAAAAATC CAGGATTTGA TTCAACAAAT CGTATCGGCA
ATCACTATTC TCGCTCTTTT AGGCGTGGTT GCGGGGGTGC TACTTATCTT TACGCTATTG
AGATTAAGCT TATCCCAACG TCAGCAGGAG ATCCGTTTGT ATCGCACATT AGGTTCAAGT
AAAAAACGGA TCAATACAAC TCTGTGGGCC GAATACGGCA TTATGGCGTT GATAGCTAGC
GGTGTCGCGG TATTCGCTGC CGAAGTTTGT GTTGCCGCGG TAATGATATA TGGCTTCGAC
CTAAACGCAC AAATTCACCC CGAATTGTGG ATAGCTTTAC CACTGGCAAC ATTTGTTACG
TTGGCACTTG TCGTAATGAG TTTGTTGAAA AGATTGTTAA CGCCAGTAAA CACTTAA
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| Protein sequence | MSAVSSSEAT STERSSAIKH SSNKSLIRWS FGEIRQGNLW PISVALILVI ASIFALSALA
ERMEQVIVKQ GKDALTADAV FVSANPIPDT LLASTENLER STMTRFATMA FSDNGMQLIS
VRAVDDNYPL MGELVLDNNP SGRVKENQLW LDERIMAQLD VKSGDSVTIG DADFTVSGAV
LMEPGLSFNP FQQMPSAYIH QKDVEKTGAI QVGSRVQYRL FLQADDKTLK GLQEDTVLSP
SDRWRTQDTA SRSNEVFERT TQYLSLTVAI VIIMAATTLV LTCQNYVNSR TQTIAMLKSL
GASRRWIEKW LFIQVTILLI SASVVGLLLG SGLEYLLRIP LKDLLPEPLP SYGVTPYLVS
FISAVLITVP ALGIPLLGLI TTPALEVLQQ GKAQRSWKRM LLVLVPVVPL LLLYADNTLV
WIVLIGIAVL FVVLAAVSVA LTKLFARIST QPAMKLALSR INRTPVTSGL QFGALALSLM
LLSIIWLVRS DILADWERTL PADAPNVFAL NIGDYELDSY LETLDKNGVT RSQAYPIIRG
RLTEINGQNV KEIEYEGEGS DAIRRELNLT WGNSLPEYND VLAGEWTNKG SVSVEADVAN
DLGIELGDKL RFVINSQNYD AVVDTIRYVE WRDMKPNFYF IFSSDVMANL PGSYLISYRI
DEGNEALLTS MSRSHPTVSV LDIRTMGEKI QDLIQQIVSA ITILALLGVV AGVLLIFTLL
RLSLSQRQQE IRLYRTLGSS KKRINTTLWA EYGIMALIAS GVAVFAAEVC VAAVMIYGFD
LNAQIHPELW IALPLATFVT LALVVMSLLK RLLTPVNT
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