Gene VEA_000160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000160 
Symbol 
ID8558465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp171616 
End bp172632 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content45% 
IMG OID646407825 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_003287313 
Protein GI262395460 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0154193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAC TTGTTACGGG TGGTATGGGC TATATTGGTA GCCATACATG TATTCAAATG 
ATCGAAGCTG GTATGACGCC AGTGATTCTA GATAACCTGT ACAACAGTAA GTCTACGGTC
TTAGAGCGCA TTGAAAAGGT ATGTGGCGTA AAGCCAACCT TCATCCAAGC CGATATCAGA
GATAAATCGA CAATGGTAGA GGTTCTAAAA TCGCACGATA TAGAAGCGGT TATCCATTTT
GCAGGTTTAA AGGCCGTCGG TGAGTCCGTA GCAAAACCTC TAGAGTATTA TGACAACAAT
GTGAATGGCA CTTTGGTATT GGTTGATGCA ATGCGCGAAG CTGGAGTTAA ATCGTTGGTA
TTTAGCTCCT CAGCAACTGT CTATGGCGAT CCTGCATCTG TTCCAATCAC AGAAGACTTT
CCAACTAGCG CAACTAACCC TTACGGACGC AGTAAATTAA TGGTGGAAGA GTGTTTAACA
GACTTCCAAA AGGCGAATCC AGATTGGAGC ATCACACTTC TTCGTTACTT TAACCCTGTA
GGTTCACATC CAACAGGTGA GTTAGGTGAA GATCCTCAAG GTATTCCAAA TAACCTAATG
CCGTTTGTTT CTCAAGTTGC GGTGGGCCGC CGAGAGTTCC TCTCTGTATT CGGTAGCGAC
TACCCAACGA AAGATGGCAC CGGCGTGCGT GACTACATTC ATGTGATGGA CTTATCCGAT
GGTCACGTCG CTGCTTTGGA AAAAGTAGGT AACAAAGCTG GGCTTCATGT CTACAACCTT
GGCACTGGCA ATGGCTACAG TGTGCTTGAA ATGGTGAAAG CGTTTGAAAC CGCAAGTGGT
AAAGATGTTC CATACCAACT TGTTGAACGT CGTCCAGGCG ATATTGCGGA GTGCTGGGCT
GATCCATCAA AAGCAATGAA TGAGTTAGGT TGGAAAGCGT CTCGCACTCT AGAAGAAATG
ACGGGTGATA CATGGCGTTG GCAATCTAAC AACCCTCAAG GTTATCCAGA CGCCTAA
 
Protein sequence
MKVLVTGGMG YIGSHTCIQM IEAGMTPVIL DNLYNSKSTV LERIEKVCGV KPTFIQADIR 
DKSTMVEVLK SHDIEAVIHF AGLKAVGESV AKPLEYYDNN VNGTLVLVDA MREAGVKSLV
FSSSATVYGD PASVPITEDF PTSATNPYGR SKLMVEECLT DFQKANPDWS ITLLRYFNPV
GSHPTGELGE DPQGIPNNLM PFVSQVAVGR REFLSVFGSD YPTKDGTGVR DYIHVMDLSD
GHVAALEKVG NKAGLHVYNL GTGNGYSVLE MVKAFETASG KDVPYQLVER RPGDIAECWA
DPSKAMNELG WKASRTLEEM TGDTWRWQSN NPQGYPDA