Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000158 |
Symbol | |
ID | 8558463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 169200 |
End bp | 171281 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646407823 |
Product | TonB-dependent heme and hemoglobin receptor HutA |
Protein accession | YP_003287311 |
Protein GI | 262395458 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00497898 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAAA AATCAATTTT GTCAGCCTCT ATTCTGATTG CACTATCCCA AGGTGCCTAC GCTGAAGATC ATTCAACCTT CAATGAAGTG GTCGTGACTG CGACTCGTAC TAATAGCCAA ATCGAAGACA CTGCTGCTTC TGTTGCGGTC GTTACTGATA AGAACATCGA AGAAAGCATG GTCACTGGCT TAGATGACCT CTTTGAGTAC ACGCCAGGAG TCACGGTTAA GACAAACTCT CGCCAAGGTG TCCAGAGTAT CAATATCCGT GGTATCGAAG GCAATCGAAT TAAAGTTCTT GTGGACGGCG TATCTCAAGG TAACCAGTTC GAATCAGGGA ATACGTTCAT TAACTCTGCT CGCGTTAACG TGGATACCGA CCTAATAAAA GCGGTTGAAA TTGTAAAAGG TGCAGCATCG TCTCTACATG GTTCTGACGC AATTGGTGGC ATTGTTGCAT TTGAAACTAA AGATCCGGCT GATTTCCTTA AGGGTCGTAA CTTTGGTGGC CATGCGAAGT TAAACTACTC TTCCGAAGAC AATACATTCA GTGAATCTGT GGCATTAGCG CACAAAACTG GCGATTTGGA ATCTTTACTT GCTTATACGC GTCGCGACGG CAATGAACTG GATAACTTTG GAGATCTAGC AGATGCAGAT ACAGAAGCGA ACAACTTACT GGTTAAGCTT CAGTACCAAC TCAATGATGC ACATCGTGTT GAGTTCAATG GGAATTATAT TCGCAACAAA GGCAACGGAA AGCAGTCTTA CAACGGTTAT ACTAATGCAA CAAGTGAAGA TGTAACAGAA CAATATCAAG TTGGTATAAA ACATATTTGG GAGATGCAAA CGGCCGTAGC GGACTCCCTT ACCTGGCAAC TAGATTGGCT TAGCAAAGAA GAAAACGGCA TTACTGATCG TGTTAAAGGT CAGAATAACC AACGTAAAGA CTACATCTAC GAGGATGAAG GCTACCAGTT TGATTCTCAG TTCGACAAAT ATCTCATGCT TGGTAGTACA GAGCATTACT TTGTGTACGG TGCATCCTTC AGTGATAAAG ACATTAAGAA CGTTAACAAA GAGTACAACA GTGCAAGCGC AAACAAAGAA ATTTTCTATA TCCCTTCTGC GAGCGAGCGT CGTTACGGGC TCTTTTTACA AGACGAAATT ACGGTAGGTA ACTTTACGAT TACCCCGGGC GTACGGTGGG ATGCATTTGA AACCGATCCA GGTGACACAA GCAGCAACCC AAGTGGTAAC GCGGCTAGCG ACTACAAAAA GTTTTCTGAT TCTGCATTTA CAGGCCGCTT AGGTTCTGTT TATAAGCTTA ATGAACAACA TCGTTTATTC GCGCAAATCA GCCAAGGTTT CCGTGCTCCA GATTTCCAAG AGTTGTACTA CTCCTTCGGC AACCCAATGC ATGGCTACAT TTTTAAGCCA AATCCTGATT TAAAAGCAGA AGACAGCATT TCGTACGAAT TTGGTTGGCG ACATAATAAT GACATTTCTA GCAGTGAAGT GTCAGTTTTC TACAGCGATT ACGACAACTT CATCGAGAGT AAAACCGTCT CTGGCACTTG GACACCAGTG ACTGACCCTG CGATTCTGCA GTACGTAAAT ATTGGCAAAG CGACAATTAA AGGTATTGAG TTTTCAAACC AACTTTCGTG GAACAAGTTC ATGCCAATCG AAGGCTTTAG CTCTCGTTTA GCAGCGGCAT ATACGGAAGG TGAAGATGGA AACAATAATC CACTAAACAG TGTTAACCCT TGGAACCTTG TCGCTGGCTT TAATTACGAT TCAGAACAAA ACTGGGGAAC CACGTTAACC ATTAACTACA CCGCATCTAA AGATAAAAGC GACATAAATG ACGATAAAGT ATTGCCTATC TCCGCAGCTA CGGTTGTAGA TGTCACCGCG TACTACAAAC CTATTAAAGA CCTTACGTTG CGAGCAGGTC TGTTCAACGT GACAGATGAA GAGTACTACA ATTGGAATGA TGTGCGTGAC CTTCAGACAG AAAACAAAGA TCTGACTCAA GCTGGGAGGA ACTGGTCAAT TACAGCTAAA TACGAGTTCT AA
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Protein sequence | MYKKSILSAS ILIALSQGAY AEDHSTFNEV VVTATRTNSQ IEDTAASVAV VTDKNIEESM VTGLDDLFEY TPGVTVKTNS RQGVQSINIR GIEGNRIKVL VDGVSQGNQF ESGNTFINSA RVNVDTDLIK AVEIVKGAAS SLHGSDAIGG IVAFETKDPA DFLKGRNFGG HAKLNYSSED NTFSESVALA HKTGDLESLL AYTRRDGNEL DNFGDLADAD TEANNLLVKL QYQLNDAHRV EFNGNYIRNK GNGKQSYNGY TNATSEDVTE QYQVGIKHIW EMQTAVADSL TWQLDWLSKE ENGITDRVKG QNNQRKDYIY EDEGYQFDSQ FDKYLMLGST EHYFVYGASF SDKDIKNVNK EYNSASANKE IFYIPSASER RYGLFLQDEI TVGNFTITPG VRWDAFETDP GDTSSNPSGN AASDYKKFSD SAFTGRLGSV YKLNEQHRLF AQISQGFRAP DFQELYYSFG NPMHGYIFKP NPDLKAEDSI SYEFGWRHNN DISSSEVSVF YSDYDNFIES KTVSGTWTPV TDPAILQYVN IGKATIKGIE FSNQLSWNKF MPIEGFSSRL AAAYTEGEDG NNNPLNSVNP WNLVAGFNYD SEQNWGTTLT INYTASKDKS DINDDKVLPI SAATVVDVTA YYKPIKDLTL RAGLFNVTDE EYYNWNDVRD LQTENKDLTQ AGRNWSITAK YEF
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