Gene VEA_000158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000158 
Symbol 
ID8558463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp169200 
End bp171281 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content43% 
IMG OID646407823 
ProductTonB-dependent heme and hemoglobin receptor HutA 
Protein accessionYP_003287311 
Protein GI262395458 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00497898 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAA AATCAATTTT GTCAGCCTCT ATTCTGATTG CACTATCCCA AGGTGCCTAC 
GCTGAAGATC ATTCAACCTT CAATGAAGTG GTCGTGACTG CGACTCGTAC TAATAGCCAA
ATCGAAGACA CTGCTGCTTC TGTTGCGGTC GTTACTGATA AGAACATCGA AGAAAGCATG
GTCACTGGCT TAGATGACCT CTTTGAGTAC ACGCCAGGAG TCACGGTTAA GACAAACTCT
CGCCAAGGTG TCCAGAGTAT CAATATCCGT GGTATCGAAG GCAATCGAAT TAAAGTTCTT
GTGGACGGCG TATCTCAAGG TAACCAGTTC GAATCAGGGA ATACGTTCAT TAACTCTGCT
CGCGTTAACG TGGATACCGA CCTAATAAAA GCGGTTGAAA TTGTAAAAGG TGCAGCATCG
TCTCTACATG GTTCTGACGC AATTGGTGGC ATTGTTGCAT TTGAAACTAA AGATCCGGCT
GATTTCCTTA AGGGTCGTAA CTTTGGTGGC CATGCGAAGT TAAACTACTC TTCCGAAGAC
AATACATTCA GTGAATCTGT GGCATTAGCG CACAAAACTG GCGATTTGGA ATCTTTACTT
GCTTATACGC GTCGCGACGG CAATGAACTG GATAACTTTG GAGATCTAGC AGATGCAGAT
ACAGAAGCGA ACAACTTACT GGTTAAGCTT CAGTACCAAC TCAATGATGC ACATCGTGTT
GAGTTCAATG GGAATTATAT TCGCAACAAA GGCAACGGAA AGCAGTCTTA CAACGGTTAT
ACTAATGCAA CAAGTGAAGA TGTAACAGAA CAATATCAAG TTGGTATAAA ACATATTTGG
GAGATGCAAA CGGCCGTAGC GGACTCCCTT ACCTGGCAAC TAGATTGGCT TAGCAAAGAA
GAAAACGGCA TTACTGATCG TGTTAAAGGT CAGAATAACC AACGTAAAGA CTACATCTAC
GAGGATGAAG GCTACCAGTT TGATTCTCAG TTCGACAAAT ATCTCATGCT TGGTAGTACA
GAGCATTACT TTGTGTACGG TGCATCCTTC AGTGATAAAG ACATTAAGAA CGTTAACAAA
GAGTACAACA GTGCAAGCGC AAACAAAGAA ATTTTCTATA TCCCTTCTGC GAGCGAGCGT
CGTTACGGGC TCTTTTTACA AGACGAAATT ACGGTAGGTA ACTTTACGAT TACCCCGGGC
GTACGGTGGG ATGCATTTGA AACCGATCCA GGTGACACAA GCAGCAACCC AAGTGGTAAC
GCGGCTAGCG ACTACAAAAA GTTTTCTGAT TCTGCATTTA CAGGCCGCTT AGGTTCTGTT
TATAAGCTTA ATGAACAACA TCGTTTATTC GCGCAAATCA GCCAAGGTTT CCGTGCTCCA
GATTTCCAAG AGTTGTACTA CTCCTTCGGC AACCCAATGC ATGGCTACAT TTTTAAGCCA
AATCCTGATT TAAAAGCAGA AGACAGCATT TCGTACGAAT TTGGTTGGCG ACATAATAAT
GACATTTCTA GCAGTGAAGT GTCAGTTTTC TACAGCGATT ACGACAACTT CATCGAGAGT
AAAACCGTCT CTGGCACTTG GACACCAGTG ACTGACCCTG CGATTCTGCA GTACGTAAAT
ATTGGCAAAG CGACAATTAA AGGTATTGAG TTTTCAAACC AACTTTCGTG GAACAAGTTC
ATGCCAATCG AAGGCTTTAG CTCTCGTTTA GCAGCGGCAT ATACGGAAGG TGAAGATGGA
AACAATAATC CACTAAACAG TGTTAACCCT TGGAACCTTG TCGCTGGCTT TAATTACGAT
TCAGAACAAA ACTGGGGAAC CACGTTAACC ATTAACTACA CCGCATCTAA AGATAAAAGC
GACATAAATG ACGATAAAGT ATTGCCTATC TCCGCAGCTA CGGTTGTAGA TGTCACCGCG
TACTACAAAC CTATTAAAGA CCTTACGTTG CGAGCAGGTC TGTTCAACGT GACAGATGAA
GAGTACTACA ATTGGAATGA TGTGCGTGAC CTTCAGACAG AAAACAAAGA TCTGACTCAA
GCTGGGAGGA ACTGGTCAAT TACAGCTAAA TACGAGTTCT AA
 
Protein sequence
MYKKSILSAS ILIALSQGAY AEDHSTFNEV VVTATRTNSQ IEDTAASVAV VTDKNIEESM 
VTGLDDLFEY TPGVTVKTNS RQGVQSINIR GIEGNRIKVL VDGVSQGNQF ESGNTFINSA
RVNVDTDLIK AVEIVKGAAS SLHGSDAIGG IVAFETKDPA DFLKGRNFGG HAKLNYSSED
NTFSESVALA HKTGDLESLL AYTRRDGNEL DNFGDLADAD TEANNLLVKL QYQLNDAHRV
EFNGNYIRNK GNGKQSYNGY TNATSEDVTE QYQVGIKHIW EMQTAVADSL TWQLDWLSKE
ENGITDRVKG QNNQRKDYIY EDEGYQFDSQ FDKYLMLGST EHYFVYGASF SDKDIKNVNK
EYNSASANKE IFYIPSASER RYGLFLQDEI TVGNFTITPG VRWDAFETDP GDTSSNPSGN
AASDYKKFSD SAFTGRLGSV YKLNEQHRLF AQISQGFRAP DFQELYYSFG NPMHGYIFKP
NPDLKAEDSI SYEFGWRHNN DISSSEVSVF YSDYDNFIES KTVSGTWTPV TDPAILQYVN
IGKATIKGIE FSNQLSWNKF MPIEGFSSRL AAAYTEGEDG NNNPLNSVNP WNLVAGFNYD
SEQNWGTTLT INYTASKDKS DINDDKVLPI SAATVVDVTA YYKPIKDLTL RAGLFNVTDE
EYYNWNDVRD LQTENKDLTQ AGRNWSITAK YEF