| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000110 |
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| Symbol | |
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| ID | 8558415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 126773 |
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| End bp | 127630 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407775 |
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| Product | AraC-type DNA-binding domain-containing protein |
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| Protein accession | YP_003287263 |
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| Protein GI | 262395410 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.827796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGATA AACAAGAACG CTACGCGATT TCAGAAAAAA CCTATCAAGA GTTTATTGAT
CACAGTCGAG TACTGGCATT GGAGGAGAGA GGCATTGTGC AGTGCGGAAT TGCAACCTGT
CGTGACTTCT TCTCTGTTTA TCGTAAAAAC CAAAAAAAAC ACATGCTGCT TTACACCGTG
CGCGGTAAAG GTTGGTTAGA AAGTGGGGCG TGTCGATATG ATTTGGAGCC TGGCTCGTTG
ATCACGGTGC CTGCAGGTGT TGAAAACGGT TTTGGTATGG AAGAGGAACC CTGGCAGATC
GCATGGCTTT TTCTTATTCC TGATAGAGCA TGGCCAATGA TAGAGAGTAA TATTAGTTAC
CAGCTCACAT CTGCACCTGA GGTGATGTAT GCGTGTATCC AAACGTTGTT ACGCAGTATT
AATCTTCCTA TTGATTATGG TGGTGCGGTT GGTGCACATA GCGTGGCTCA GTTAGAGCTG
ATGTTAAACA TGCCGCCCTC AGAGTCGATA TCACGCAGCC AATTGAGGCT TCGGCGCGTA
TTCGATCTTG TCCAGCGTCA GCTCCATAAG GATTGGAGTG TCGAGCAAGT GGCAGCTTTA
TATCCATGTT CGGAGCCACA TTTGCACCGT CTGACTCAAA AGCAGTTCGG TCGAAGCCCG
ATGGCACATT TAACACGTAT GCGCATGGAA TACGCTGCTA GGTTACTTCG TTCAACAGAA
TGGCCGATTC AACATATTGG AGAGATAGTC GGATATCCAA CTAGTGCCAA CTTTAGTACA
CGTTTTAAAG CGTGGTCGAG CATGACGCCA AGAGAATTTA GGAAAAACGG AAGAGTGGAT
TGGTATATTG AGGAGTGA
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| Protein sequence | MEDKQERYAI SEKTYQEFID HSRVLALEER GIVQCGIATC RDFFSVYRKN QKKHMLLYTV
RGKGWLESGA CRYDLEPGSL ITVPAGVENG FGMEEEPWQI AWLFLIPDRA WPMIESNISY
QLTSAPEVMY ACIQTLLRSI NLPIDYGGAV GAHSVAQLEL MLNMPPSESI SRSQLRLRRV
FDLVQRQLHK DWSVEQVAAL YPCSEPHLHR LTQKQFGRSP MAHLTRMRME YAARLLRSTE
WPIQHIGEIV GYPTSANFST RFKAWSSMTP REFRKNGRVD WYIEE
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