Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000109 |
Symbol | |
ID | 8558414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 125267 |
End bp | 126652 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646407774 |
Product | adhesin |
Protein accession | YP_003287262 |
Protein GI | 262395409 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.466925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTTAA CACGCGAATA CATCGATAAA GCATTTTGGC AAAAGCTGAT TGCGATTGGC CTTCCTGTTT CACTTCAATC CATGCTTTTT GCGTTACTCG GCGTCGTGGA TATTTTCATG GTGAGCCAAC TCGGCGAATC CGCAACGGCT GCAGTCGGTG TCGGAAATCG CATTTTTTTC TTTAACCTTG CAGTCATTTT CGGTCTTTGC GGTGCAGTAA CGGTGCTGGC TTCTCAATAT TACGGCTCAG GGAACCTGGC AGGAATCCGC AGAACATTGG CGCAATCTTG GTTTATTTCC ATTTTAGTGA CGCTGCCGTT TATTTTTCTT TATGCGATTT TTGATAAAGA GATCGTCTCT TTCATGTCAG ACGATCCTGA ATACGTCACT TATGCACGTG ATTATCTTGT GGTTACGGGC TTTAGTCTTA TTGCAACGGC CATAGTGGTA CCTATTGAAG CGGTATTGCG CTCCGTAGGC CAAACCAAAC TGGCAACCAA CGTCAGTGTC TCGGCTATTG TCGTGAATAT CGTGCTTAAT TATGTTTTGA TTTTCGGTTT ATTCGGCTTC CCTCAATGGG GCGTATTTGG TGCAGCCGTT GGCAGCTTTG TTTCTCGATT TTTCCAAACG GCAGTGTTGA TTTACTTTTT CTGTAAACGC TACGCATACC TTATTCCGAC CAAGTTCGAT TGGGCGCAAG GCCGTTTAAA GCAGTATCGT CAAAAATACT TTAAGGTTTC TCTACCCATG CTGGTCCACG ATGCGCTCTG GACTGGTGGA CTGATCGTTT ACAGCATCAT CTATGGTCAA TTGGGCGTTT CAGAACTTGC GATCATCTCA TTCTTATCGC CAATTGAAGG TGTACTGATT TCAACCTTTA TGGGATTTGC GGTCGCTGCA TCCGTTCTTC TTGGTAATGA TATTGGCGCA AAACATTATG ATCGGGTCGA GAAAACGGCA TGGTGGTATG TGTTAACCAG CGCAATCTTA GCCACCTTAC TGTTTTTCCT AGTGTGGTTG AGCTCGCCTT TGATTCATCA TCTATTGGTA CTAAGCCCAT TAACCGATGC AGAAATGGCA CTTAACGTAT GCTTAGTCAT GGCGCTGGGT ATGATTTTGA GAGTGTTTAA CATGGTAGGG ATTGGCGGCG TACTAAAGAG TGGCGCAGAT ATTCGCTACA GCATTTTTAT TGATACGTTC GGTCAGTGGG CTATTGGTAT TCCCCTTACC TATTACACTG GTATGGTACT CGGGTTGCCT TTGCATTTTG TCTTGATGTC TTTGCTAGCT GAAGAATTTG TGAAAGGCGT ACTGACGACT TATCGTATCC AATCTAAACG TTGGATAAAC AATATGGTCG AAGATGACCA AACAGTGACA GCGTAA
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Protein sequence | MLLTREYIDK AFWQKLIAIG LPVSLQSMLF ALLGVVDIFM VSQLGESATA AVGVGNRIFF FNLAVIFGLC GAVTVLASQY YGSGNLAGIR RTLAQSWFIS ILVTLPFIFL YAIFDKEIVS FMSDDPEYVT YARDYLVVTG FSLIATAIVV PIEAVLRSVG QTKLATNVSV SAIVVNIVLN YVLIFGLFGF PQWGVFGAAV GSFVSRFFQT AVLIYFFCKR YAYLIPTKFD WAQGRLKQYR QKYFKVSLPM LVHDALWTGG LIVYSIIYGQ LGVSELAIIS FLSPIEGVLI STFMGFAVAA SVLLGNDIGA KHYDRVEKTA WWYVLTSAIL ATLLFFLVWL SSPLIHHLLV LSPLTDAEMA LNVCLVMALG MILRVFNMVG IGGVLKSGAD IRYSIFIDTF GQWAIGIPLT YYTGMVLGLP LHFVLMSLLA EEFVKGVLTT YRIQSKRWIN NMVEDDQTVT A
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