| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000109 |
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| Symbol | |
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| ID | 8558414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 125267 |
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| End bp | 126652 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407774 |
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| Product | adhesin |
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| Protein accession | YP_003287262 |
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| Protein GI | 262395409 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.466925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTTAA CACGCGAATA CATCGATAAA GCATTTTGGC AAAAGCTGAT TGCGATTGGC
CTTCCTGTTT CACTTCAATC CATGCTTTTT GCGTTACTCG GCGTCGTGGA TATTTTCATG
GTGAGCCAAC TCGGCGAATC CGCAACGGCT GCAGTCGGTG TCGGAAATCG CATTTTTTTC
TTTAACCTTG CAGTCATTTT CGGTCTTTGC GGTGCAGTAA CGGTGCTGGC TTCTCAATAT
TACGGCTCAG GGAACCTGGC AGGAATCCGC AGAACATTGG CGCAATCTTG GTTTATTTCC
ATTTTAGTGA CGCTGCCGTT TATTTTTCTT TATGCGATTT TTGATAAAGA GATCGTCTCT
TTCATGTCAG ACGATCCTGA ATACGTCACT TATGCACGTG ATTATCTTGT GGTTACGGGC
TTTAGTCTTA TTGCAACGGC CATAGTGGTA CCTATTGAAG CGGTATTGCG CTCCGTAGGC
CAAACCAAAC TGGCAACCAA CGTCAGTGTC TCGGCTATTG TCGTGAATAT CGTGCTTAAT
TATGTTTTGA TTTTCGGTTT ATTCGGCTTC CCTCAATGGG GCGTATTTGG TGCAGCCGTT
GGCAGCTTTG TTTCTCGATT TTTCCAAACG GCAGTGTTGA TTTACTTTTT CTGTAAACGC
TACGCATACC TTATTCCGAC CAAGTTCGAT TGGGCGCAAG GCCGTTTAAA GCAGTATCGT
CAAAAATACT TTAAGGTTTC TCTACCCATG CTGGTCCACG ATGCGCTCTG GACTGGTGGA
CTGATCGTTT ACAGCATCAT CTATGGTCAA TTGGGCGTTT CAGAACTTGC GATCATCTCA
TTCTTATCGC CAATTGAAGG TGTACTGATT TCAACCTTTA TGGGATTTGC GGTCGCTGCA
TCCGTTCTTC TTGGTAATGA TATTGGCGCA AAACATTATG ATCGGGTCGA GAAAACGGCA
TGGTGGTATG TGTTAACCAG CGCAATCTTA GCCACCTTAC TGTTTTTCCT AGTGTGGTTG
AGCTCGCCTT TGATTCATCA TCTATTGGTA CTAAGCCCAT TAACCGATGC AGAAATGGCA
CTTAACGTAT GCTTAGTCAT GGCGCTGGGT ATGATTTTGA GAGTGTTTAA CATGGTAGGG
ATTGGCGGCG TACTAAAGAG TGGCGCAGAT ATTCGCTACA GCATTTTTAT TGATACGTTC
GGTCAGTGGG CTATTGGTAT TCCCCTTACC TATTACACTG GTATGGTACT CGGGTTGCCT
TTGCATTTTG TCTTGATGTC TTTGCTAGCT GAAGAATTTG TGAAAGGCGT ACTGACGACT
TATCGTATCC AATCTAAACG TTGGATAAAC AATATGGTCG AAGATGACCA AACAGTGACA
GCGTAA
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| Protein sequence | MLLTREYIDK AFWQKLIAIG LPVSLQSMLF ALLGVVDIFM VSQLGESATA AVGVGNRIFF
FNLAVIFGLC GAVTVLASQY YGSGNLAGIR RTLAQSWFIS ILVTLPFIFL YAIFDKEIVS
FMSDDPEYVT YARDYLVVTG FSLIATAIVV PIEAVLRSVG QTKLATNVSV SAIVVNIVLN
YVLIFGLFGF PQWGVFGAAV GSFVSRFFQT AVLIYFFCKR YAYLIPTKFD WAQGRLKQYR
QKYFKVSLPM LVHDALWTGG LIVYSIIYGQ LGVSELAIIS FLSPIEGVLI STFMGFAVAA
SVLLGNDIGA KHYDRVEKTA WWYVLTSAIL ATLLFFLVWL SSPLIHHLLV LSPLTDAEMA
LNVCLVMALG MILRVFNMVG IGGVLKSGAD IRYSIFIDTF GQWAIGIPLT YYTGMVLGLP
LHFVLMSLLA EEFVKGVLTT YRIQSKRWIN NMVEDDQTVT A
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