Gene VEA_000106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000106 
Symbol 
ID8558411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp121331 
End bp122197 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content44% 
IMG OID646407771 
Productmetal-dependent hydrolase 
Protein accessionYP_003287259 
Protein GI262395406 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.948944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATCAC TATTTGTTAC TGCCTTATTA ATTTTTAGTT CAACATCACT TGCTCAAAAC 
TCCATCAACT TAACCAGTTG GAATATAGAA TGGCTGTCTA TAAATGGAGG TAAGGTTTCG
AGAACCAGTG ACGATTTCAT CAAACTCAAC CAATATGTGG ATAAAACTCA AGCCGACATC
ATCGCCTTTC AGGAGGTCGA CTCCAAAGCC GCGGTTCAAA AAGCCGTAGG CGATGGCTAC
GCGATTTATC TCTCTGATCG AGCTCAATCA AACAATAAGC ACCTTCAGTT TTCTGATACC
AACCAGTACA CCGGTTTTGC TGTGCGTAAA GACATTGAAG TGTCTGACCC AGCAGACTTC
TCAATCACGC GTAGTAATAG CAAGTTGCGC TTTGCCAGCT ACATCGTCGT TAACCCAAAC
CAAAAGGACG AGCTTCACCT GCTCTCTGTG CATCTAAAAG CAGGATGCAG CGGAGCATAC
AAAAACAACC GCAATTGCCA AACACTGAGC CAACAAGGAG AAGCACTTGC GAAATGGATG
AGCGAGAGAG AAAAGAAAAA GCAGCAGTAC GCCGTAATGG GCGATTTCAA TCACAACTTG
TCGTATCAAC GTGATTGGCT GTGGGCGATC ATGACGCTTG GTAACGATGC ACAATTGGTA
ACGCGAGATA CCAAAGCGGA TTGCAAGGTT CGCTCAAATA AGAACCCAAG AAAAACACAC
CAATTCCGCT CTTTGATTGA TCACATTATT GTTAGCCCGC AAATAAAAGC GAAAAACGCG
CATCAAACGC TGTTTAGCTC ACAAGATGTT TTAGATTACA AACTGAGTGA CCATTGCCCT
GTAAACGCAA CGGTAACGCT TAACTGA
 
Protein sequence
MRSLFVTALL IFSSTSLAQN SINLTSWNIE WLSINGGKVS RTSDDFIKLN QYVDKTQADI 
IAFQEVDSKA AVQKAVGDGY AIYLSDRAQS NNKHLQFSDT NQYTGFAVRK DIEVSDPADF
SITRSNSKLR FASYIVVNPN QKDELHLLSV HLKAGCSGAY KNNRNCQTLS QQGEALAKWM
SEREKKKQQY AVMGDFNHNL SYQRDWLWAI MTLGNDAQLV TRDTKADCKV RSNKNPRKTH
QFRSLIDHII VSPQIKAKNA HQTLFSSQDV LDYKLSDHCP VNATVTLN