| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000056 |
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| Symbol | |
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| ID | 8558359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 64140 |
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| End bp | 65663 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407719 |
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| Product | cytoplasmic alpha-amylase |
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| Protein accession | YP_003287209 |
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| Protein GI | 262395356 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0351894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT TTAAATTAAA ACGCACTATT TTACCTTTAA CCTTGTTGCT AAGTTCATCT
GCATTGGCTG CTGGGAATGG CACAATGATG CAGTATTTCC ATTGGTATGT GCCTAACGAT
GGCACACTGT GGACTCAAGT GGAAAATAAC GCTCCAACGC TAGCAGAAAA CGGATTCACA
GCGCTCTGGC TACCACCTGC ATACAAAGGA GCGGGTGGCA GTAATGATGT CGGCTACGGC
GTTTATGACA TGTACGACTT GGGAGAGTTT GATCAAAAAG GATCAGTGCG CACCAAATAC
GGCACGAAAG ATCAGTATCT TAGCGCTATC AATGCCGCTC ACAACAACAA TATCCAGGTT
TATGGTGACG TGGTGTTTAA CCACCGTGGT GGTGCGGATG GAAAATCTTG GGTTGATACT
AAGCGGGTAG ATTGGAACAA CCGCAACATT GAACTTGGCG ATAAATGGAT TGAAGCGTGG
GTGGAGTTTG ATTTCCCTGG ACGCAACGAC AAGTACTCTA ACTTCCATTG GACTTGGTAC
CATTTTGATG GCGTGGACTG GGACGATGCA GGTAAAGAAA AAGCCATCTT TAAGTTCAAA
GGTGAAGGTA AGGCATGGGA TTGGGAAGTC AGTTCTGAAA AGGGGAATTA CGACTACCTT
ATGTATGCTG ACTTAGACAT GGATCATCCT GAAGTTAAAC AAGAACTGAA AGATTGGGGT
GAGTGGTACA TCAACATGAC TGGTGTTGAT GGCTTTAGAA TGGATGCGGT GAAGCACATC
AAATACCAAT ATCTTCAAGA ATGGATTGAT CACCTACGTT GGAAAACAGG GAAAGAACTA
TTCACGGTCG GAGAGTACTG GAACTACGAT GTGAATCAGC TGCATAACTT TATCACCAAA
ACTTCTGGCA GCATGTCTCT ATTCGACGCA CCGTTACATA TGAACTTCTA CAATGCGTCT
AAATCGGGTG GTAGCTACGA TATGCGTCAA ATCATGGATG GTACGCTGAT GAAGGACAAT
CCAGTCAAAG CGGTAACCTT AGTAGAAAAC CATGATACTC AACCTTTGCA GGCGTTGGAG
TCGACGGTTG ATTGGTGGTT TAAGCCGCTC GCTTACGCGT TTATCTTATT GCGTGAAGAA
GGTTATCCAT CCGTGTTTTA TGCAGATTAC TACGGCGCGC AGTACAGTGA TAAAGGGCAT
GACATCAATA TGGTCAAAGT GCCTTACATC GAAGAGCTCG TAACACTGCG TAAAGACTAT
GCGTATGGCA AACAACATTC TTATCTCGAC CATTGGGATG TAATTGGCTG GACTCGCGAG
GGCGATGCAG AACATCCACA TTCAATGGCA GTGATCATGA GTGATGGACC AGGTGGCTCG
AAGTGGATGT TTACGGGCAA GCCAAGTACA CGCTATGTCG ACAAGTTGGG CATCCGAACT
GAGGACGTTT GGACAGATGC GAACGGGTGG GCTGAGTTCC CTGTAAATGG TGGATCTGTC
TCGGTTTGGG TTAGCGTTGA GTAA
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| Protein sequence | MKTFKLKRTI LPLTLLLSSS ALAAGNGTMM QYFHWYVPND GTLWTQVENN APTLAENGFT
ALWLPPAYKG AGGSNDVGYG VYDMYDLGEF DQKGSVRTKY GTKDQYLSAI NAAHNNNIQV
YGDVVFNHRG GADGKSWVDT KRVDWNNRNI ELGDKWIEAW VEFDFPGRND KYSNFHWTWY
HFDGVDWDDA GKEKAIFKFK GEGKAWDWEV SSEKGNYDYL MYADLDMDHP EVKQELKDWG
EWYINMTGVD GFRMDAVKHI KYQYLQEWID HLRWKTGKEL FTVGEYWNYD VNQLHNFITK
TSGSMSLFDA PLHMNFYNAS KSGGSYDMRQ IMDGTLMKDN PVKAVTLVEN HDTQPLQALE
STVDWWFKPL AYAFILLREE GYPSVFYADY YGAQYSDKGH DINMVKVPYI EELVTLRKDY
AYGKQHSYLD HWDVIGWTRE GDAEHPHSMA VIMSDGPGGS KWMFTGKPST RYVDKLGIRT
EDVWTDANGW AEFPVNGGSV SVWVSVE
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