| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000036 |
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| Symbol | |
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| ID | 8558335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 41000 |
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| End bp | 42025 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407695 |
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| Product | TRAP-type C4-dicarboxylate transport system component |
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| Protein accession | YP_003287189 |
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| Protein GI | 262395336 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.128375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA CAAGTAAGTT TGCACCATCA AAAACACTGA AAAAATACAG CGTTCTTGCT
TCGCTCATTG CGGCTGCAGT GACAGCGATC CCTGCGCAAG CAACGACATT AAAAATCAGT
CATGTTCGTC CACAAGGGAC AGTGGTTGAT AACGATATTA AACAACTTAG CGAGGCGCTT
AAAACCTCAA CAGACGGTGA TCTTAAGTTG CGCGTTTATG CCGCCAATGC CTTGGGTGAC
TACACCTTAG TTCAGGAACG CATTTCTGTC GGTGCTATCG ATATGGCGTT GCAACCCGCG
TCTACGTCGA CGGATAGACG CATGCAGATT GGTTTGTTGC CTTTCTTAGC CAATGATTGG
GAAGAGGCGC AAAACGTTTA TGGTATCGGC GCACCAGTAC GTGAAGCCAT GGAAGAGTTG
TTTGAAAAAC AAGACATTAC TCTGCTTGCT GCGTATCCAG TCTACTTCGG TGGTATCTCG
TTAAATCGTG AAGCTGTGGA TGCAGGCAAC CCAGATTCAG CTAAAGGTAT TAAACTGCGT
GTTCCGCCTA TCAAGAGCTT CCAACTTTTG GCTGATAATG TTGGTTACAT CGGTTCCCCA
CTGCCGTTCT CTGAAGCCTT CACCGCGGTT CAAACTGGCG TAGTTGATGG TGTGATTGGT
TCTGGCGCTG AAGGTTATTA CGCATCATTC CGTGACGTGA CAAAGACATA TATTCCTTTG
AACACGCACT TCGAAATCTG GTACTTGATG ATCAACTCAG AGCGTTTGGA TGACTTAGAC
GAAAATGAGC AACAAGCACT AAAGGCCGCA GCGCAACAGT TTGAGTCTCG TCGCTGGCAG
GCGGCTCAAG TCGACCAAAA AGAAAACGAA CAAAGACTCG TTGAAGCAGG CGCCACCATT
GTAGAAATGA CACCAGCGCA ACTGCGAAAA ACAGCGGATA AAGTTCGCGC AACAGTATGG
CCACAGATCA TCGAAGATAT CGGCTCAGAC TGGAGCCAGC CAATCATAGA TAAAGCGCTG
AATTAG
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| Protein sequence | MFKTSKFAPS KTLKKYSVLA SLIAAAVTAI PAQATTLKIS HVRPQGTVVD NDIKQLSEAL
KTSTDGDLKL RVYAANALGD YTLVQERISV GAIDMALQPA STSTDRRMQI GLLPFLANDW
EEAQNVYGIG APVREAMEEL FEKQDITLLA AYPVYFGGIS LNREAVDAGN PDSAKGIKLR
VPPIKSFQLL ADNVGYIGSP LPFSEAFTAV QTGVVDGVIG SGAEGYYASF RDVTKTYIPL
NTHFEIWYLM INSERLDDLD ENEQQALKAA AQQFESRRWQ AAQVDQKENE QRLVEAGATI
VEMTPAQLRK TADKVRATVW PQIIEDIGSD WSQPIIDKAL N
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