| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000034 |
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| Symbol | |
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| ID | 8558332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 38176 |
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| End bp | 39090 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646407692 |
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| Product | transcriptional regulator LysR family protein |
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| Protein accession | YP_003287186 |
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| Protein GI | 262395333 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000511263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATA TATCAATAAA ACAACTTGAA ACCTTCCGTA CAGTGATGCG TTCTGGCTCG
GTTACTGTGG CAGCGAAAAC TTTGTGCCGG ACTCAGCCTG CGATAAGCGC GATGCTGGTT
AGCTTGGAGA AAGAGCTTGG GTTTGCATTG TTTGAGCGGC ATAAAGGCCG GCTAATCCCA
AACCCTGAAG CGTACTTTTT ACTTGAAGAG ACAGACGCCA TTCTGGAGCG GTTATCGCGC
TCAACACAGC TTATGGCAGA GGTCAAAAAC CTAACCCGAG GGAAACTTCG CATTGCGTGC
ATGCCTGCCG CAGCGCTGTT CTTTATGCCG CATGTCATTG CAGAATTTGT GAAGGATAGA
CCAGAAGTAG AAGTATCGAT GATGATGCGC AGCTCGACCA TGGTTCAGGA CTGGGTCGCC
TCCCAGCAGT ATGATATTGG GTACTCGGAA CTACCGAAAG ACAGGGATTC TTTCCATGTC
GAACCCATTA ACCTTGAGGG GGTTTGTGCG TTGCATAAAG ACCACCCACT GGCGCTTAAA
GAAGTGATTA CCCCGAAAGA TCTGGATAAC GAACCGCTGG CTGCGCTGTA TACGCGTCAC
TCCGCAAGTG AGCATGTACG CATGCTATTT GAGGAATATG GGGCCACTTA TCGCCCAAGA
TTCGAGTTGC AAAATTACAT TTCAGGCTTC GAATTTGTGG AGCAGAAGCT GTGTGCTTGC
ATCTGTGATC CAATCAGTGC GGCCAGTTAC AAACTGTATA AATCCGGCCA AGGAAATGTG
GTGTTTCGCC CATTTACGCC AGCCGTAATG TTTGACCACG CTATTCTCAC CCCTGCGCAT
AAACCTATGT CTCAGCTTGC CAAAGTGTTT GCAGAGAGCA TACGAGGAGG AGTCAAACAA
TTCGTTTCCA TGTAG
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| Protein sequence | MSNISIKQLE TFRTVMRSGS VTVAAKTLCR TQPAISAMLV SLEKELGFAL FERHKGRLIP
NPEAYFLLEE TDAILERLSR STQLMAEVKN LTRGKLRIAC MPAAALFFMP HVIAEFVKDR
PEVEVSMMMR SSTMVQDWVA SQQYDIGYSE LPKDRDSFHV EPINLEGVCA LHKDHPLALK
EVITPKDLDN EPLAALYTRH SASEHVRMLF EEYGATYRPR FELQNYISGF EFVEQKLCAC
ICDPISAASY KLYKSGQGNV VFRPFTPAVM FDHAILTPAH KPMSQLAKVF AESIRGGVKQ
FVSM
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