Gene VEA_000034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000034 
Symbol 
ID8558332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp38176 
End bp39090 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content49% 
IMG OID646407692 
Producttranscriptional regulator LysR family protein 
Protein accessionYP_003287186 
Protein GI262395333 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000511263 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATA TATCAATAAA ACAACTTGAA ACCTTCCGTA CAGTGATGCG TTCTGGCTCG 
GTTACTGTGG CAGCGAAAAC TTTGTGCCGG ACTCAGCCTG CGATAAGCGC GATGCTGGTT
AGCTTGGAGA AAGAGCTTGG GTTTGCATTG TTTGAGCGGC ATAAAGGCCG GCTAATCCCA
AACCCTGAAG CGTACTTTTT ACTTGAAGAG ACAGACGCCA TTCTGGAGCG GTTATCGCGC
TCAACACAGC TTATGGCAGA GGTCAAAAAC CTAACCCGAG GGAAACTTCG CATTGCGTGC
ATGCCTGCCG CAGCGCTGTT CTTTATGCCG CATGTCATTG CAGAATTTGT GAAGGATAGA
CCAGAAGTAG AAGTATCGAT GATGATGCGC AGCTCGACCA TGGTTCAGGA CTGGGTCGCC
TCCCAGCAGT ATGATATTGG GTACTCGGAA CTACCGAAAG ACAGGGATTC TTTCCATGTC
GAACCCATTA ACCTTGAGGG GGTTTGTGCG TTGCATAAAG ACCACCCACT GGCGCTTAAA
GAAGTGATTA CCCCGAAAGA TCTGGATAAC GAACCGCTGG CTGCGCTGTA TACGCGTCAC
TCCGCAAGTG AGCATGTACG CATGCTATTT GAGGAATATG GGGCCACTTA TCGCCCAAGA
TTCGAGTTGC AAAATTACAT TTCAGGCTTC GAATTTGTGG AGCAGAAGCT GTGTGCTTGC
ATCTGTGATC CAATCAGTGC GGCCAGTTAC AAACTGTATA AATCCGGCCA AGGAAATGTG
GTGTTTCGCC CATTTACGCC AGCCGTAATG TTTGACCACG CTATTCTCAC CCCTGCGCAT
AAACCTATGT CTCAGCTTGC CAAAGTGTTT GCAGAGAGCA TACGAGGAGG AGTCAAACAA
TTCGTTTCCA TGTAG
 
Protein sequence
MSNISIKQLE TFRTVMRSGS VTVAAKTLCR TQPAISAMLV SLEKELGFAL FERHKGRLIP 
NPEAYFLLEE TDAILERLSR STQLMAEVKN LTRGKLRIAC MPAAALFFMP HVIAEFVKDR
PEVEVSMMMR SSTMVQDWVA SQQYDIGYSE LPKDRDSFHV EPINLEGVCA LHKDHPLALK
EVITPKDLDN EPLAALYTRH SASEHVRMLF EEYGATYRPR FELQNYISGF EFVEQKLCAC
ICDPISAASY KLYKSGQGNV VFRPFTPAVM FDHAILTPAH KPMSQLAKVF AESIRGGVKQ
FVSM