Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000026 |
Symbol | |
ID | 8558324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 26304 |
End bp | 27269 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646407684 |
Product | hypothetical protein |
Protein accession | YP_003287178 |
Protein GI | 262395325 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCGG AGCAATTTTA TCGAGATCTA AAGCAACATC CGTTGTTTGA AGCAATTCAC CTTATCGAAC ACGAGATCTT GCAAGCCGAG GCACAAATAG GGACAGATGC TCTACCGAAG CATGAAAAAC TACACTTAAA GGTCAATCCA TCGTTAGGTT TTGAAAATGC GCAGCTTTGC GATCTAAAAC ATATTGATAG CCACAAGCTA GCTCTTGAAA CCAATTTAAT AGGCCTAACG GGTGAGCAGG GGGTGCTTCC TCAGCACTAC AGCGAGTTAG CTTTGCATCG TCAAAAAGAA GGCGATACGG CAATGGTGGA CTTCTACGAT ATTTTTAACC ATCGTTTACT ATCTCTTTAC TATCGATGCT GGCAACTGAG TCAATTGACC GTTCAGTCTC GTGCTCATGC ACAGGGATTA CGTTCACCTT TAGAAGATTG TAAGTCGGCA TTAACTGGCC AGGGTAGTTC GTTGTCCCTG CATTATGGTG GTGTTTTTGC TTCACCGACG AGAAGCAAAG CTGGACTAAA AAGTGTTCTT GAATGTTTAT CTGGATGCCA AGTAAAGATT CATGAGTTTC AAGGGCAGTG GCTACATCTT GCAAAAGAAG AGCAAACACG TCTTTCATCT CGAACTATGC CAGAAGGGCA GTTTGCTCAA CTTGGTTCCG GAGCATCCTT AGGCTCGAAA GCTTGGAATA TAAACGCAGG AACAACGATC GAGTTTCTGC CAAAGCACAA AGGTCTGGTT AGTAAATTAC TGCCTAACCA TCCAAATGTA GAAATTATTA AACGTGCGGC TTATGAATTT ATTGGTAAGC ATAAGCAAGT GAAATGGCAG CTCACCACCA AACATAGTTT ATTACCTCAA GTTTGTTTAT CAAAAAAACA TGGTCAGTTA GGTGTTGGTT CTGTACTTAA AAAACATAAA CGCACAAAAG ATCGAACCAT AACAATTACT ATTTAA
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Protein sequence | MIAEQFYRDL KQHPLFEAIH LIEHEILQAE AQIGTDALPK HEKLHLKVNP SLGFENAQLC DLKHIDSHKL ALETNLIGLT GEQGVLPQHY SELALHRQKE GDTAMVDFYD IFNHRLLSLY YRCWQLSQLT VQSRAHAQGL RSPLEDCKSA LTGQGSSLSL HYGGVFASPT RSKAGLKSVL ECLSGCQVKI HEFQGQWLHL AKEEQTRLSS RTMPEGQFAQ LGSGASLGSK AWNINAGTTI EFLPKHKGLV SKLLPNHPNV EIIKRAAYEF IGKHKQVKWQ LTTKHSLLPQ VCLSKKHGQL GVGSVLKKHK RTKDRTITIT I
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