| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000022 |
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| Symbol | |
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| ID | 8558320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 21711 |
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| End bp | 23210 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407680 |
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| Product | uncharacterized protein ImpD |
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| Protein accession | YP_003287174 |
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| Protein GI | 262395321 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.507216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCACTTA ACTTTCGCGA TCCCAGTAAG CTAAAGCATG AATTCAGCAC AGGAGGCCAT
GCTGAGCTTG ATAGCCCGTG GTTGACTCGA TTCAATGAAT CTTCTGATCT TGTAGAGGCA
GCTCGAATTT GGCTAGAAGG TACGCGTTCA AGAGATTTGG ACAGTTTTCG TCATAGTGTG
ATGAACACGA TAAACCGAAT TGATGAGCTA TTAGAGTCTC AATTAAACGA AATAATACAT
CATCCTGAGT TTCAACAACT CGAAAGAGGT TGGATCGGCG TGAGGTATTT ATGCGAACAG
GTCGACACTC GCTCATCAGA CTCCGTCAAA GTCAAGGTGT TGGCGGCAAC ATGGAATGAA
GTCAGTAAAG ATGCACTAAA AGCCATCGAA TTTGACCAAT CAGCACTATT TAAGCTGCTC
TATCAAAATG AATATGGCAT GGCCGGGGGA GAACCCTTTG GCGTGGTAGT TGGCGATTAT
CAACTTCGTT GTGATGCGAG TAAAAATTAT TTTGATAGAG ATCTGTCTGT GCTCAGCAAG
ATCTCTCAGT CTGCAGCGGC AGCATTCAGC CCGTTCATTA TGTCAGCATC GCCGGAGATG
TTTGGTGTTG ACAGTTTTTC ACAGCTCTCT GCGATAAGAG ATATTGCGGC CCAATTTGAA
CAGGCAGACT ACGCAAAATG GCGCAGTTTG AGAGACAACG ATGATACCAA ATTTATTGGC
CTGACTGCGC CGAATGTTTT ATTCCGTCAG CCATATAAAA GTGATGGTTC GCGCAACGAT
CAGTTCGACT TTCAAGAGCA TGTCTACGAT TCTAATCGCG ATTTGCTATG GGGGAGTAGC
GCGTATTGTT TTGCGGCCGT ATCAATTAGA GCGTTTCGGG AGCATGGGTG GTTTACGCAC
ATGCGAGGCA TTAAGCAAGG GGATTATAGT CAGGGCATTA TCGTCGCTCC TACTAGGAAC
AAAATGCGTG TTAATGGCAA GAATGACCGT GAAAGATGCC CTTTAAACTT AAAGATCTCT
GAGAGAAAAG AGCAAGAGTT GTCTGAATGC GGTTTCATTT CTATTTCTCC TGTACCTGAA
ACCGATATGG TAGGGATGAC CTCGAATGTA TCTCTCTACA AGCCTAAGCA ATATGCAGAA
AAACACATTT CAACGAATGC AAAGCTCACG TCGATGTTGC AATACACGTT GTGTGTGTCG
CGAGTTGCAC ATTATCTCAA GGTTATGGGG CGTGACAAGA TTGGTGGGTA TCAAGATGCA
GAAAGCCTAG AGCGAGACTT TCAACGATGG TTGCATCAGT ACACTACCGC GTCGGATGAA
GCATCTGATG AACTTAGGGC GAAGTACCCC TTAAATGAAG CGAAAATTAC GGTTCGAGAG
AAAAGAGAAA CTCCAGGACA CTATTACTCT GTTATCCATT TGCGACCGCA CTTCCAGCTC
GATCAAATGG TATCTAGCAT TAAATTAATT ACTGAATTAT CACCAGAGCA CTTGGTGTAA
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| Protein sequence | MSLNFRDPSK LKHEFSTGGH AELDSPWLTR FNESSDLVEA ARIWLEGTRS RDLDSFRHSV
MNTINRIDEL LESQLNEIIH HPEFQQLERG WIGVRYLCEQ VDTRSSDSVK VKVLAATWNE
VSKDALKAIE FDQSALFKLL YQNEYGMAGG EPFGVVVGDY QLRCDASKNY FDRDLSVLSK
ISQSAAAAFS PFIMSASPEM FGVDSFSQLS AIRDIAAQFE QADYAKWRSL RDNDDTKFIG
LTAPNVLFRQ PYKSDGSRND QFDFQEHVYD SNRDLLWGSS AYCFAAVSIR AFREHGWFTH
MRGIKQGDYS QGIIVAPTRN KMRVNGKNDR ERCPLNLKIS ERKEQELSEC GFISISPVPE
TDMVGMTSNV SLYKPKQYAE KHISTNAKLT SMLQYTLCVS RVAHYLKVMG RDKIGGYQDA
ESLERDFQRW LHQYTTASDE ASDELRAKYP LNEAKITVRE KRETPGHYYS VIHLRPHFQL
DQMVSSIKLI TELSPEHLV
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