Gene VEA_000017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000017 
Symbol 
ID8558315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp16997 
End bp17692 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content43% 
IMG OID646407675 
Productprotein phosphatase ImpM 
Protein accessionYP_003287169 
Protein GI262395316 
COG category[S] Function unknown 
COG ID[COG3913] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03373] type VI secretion-associated protein, BMA_A0400 family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCGA ACCTTGTAAC ATCAGCCTGG GGTTATATCG GTAAAATGCC TGCAAAAGGA 
GACTTTGTGA AAGATGGCTT ATCACAAGAT TTTTCAGAGC GCTGGCATGA CTGGCAGCAG
GCTGTTATTG CAGTCAGCAG AGAACAATTG GGTGAAAGTT GGAATGAGCA CTTTTTAACC
GCGCCTGTGT GGCACTTTGC TCTGGATGTT AGTTACTTAG AAGACTCGAC ATACATTGGT
AGCATGATTC CTAGTGTAGA TGCATGCGGT AGATACTTTT TCTTTACTAT AGCTCGTGCC
GTAAAAGGTG AAGCTGCGCA ATATTGGGGG GACAAAGCTT GGACCGAGGA CAGTGCATCT
CTTGCCCTAG CAGTACTTGA GGACGACTTT GTATTTGATG TTTGGCATAA GAGCATGCAA
GAAAAAAACG ATTTAGTGGC GAATGTAAAA AGTGAAGTGC GGCCTCTTAA GTTTCTTTAT
CAAAGCCAAA TATCTACGAT TTTTCATGAT CAAGGTGGAG CAGATCAAAG CGCACTTTTG
AATTACCTCA TTAAAGAAAA ATTGAGTAAG CCATGCTTTT GGTGGACTGA AGGCTCGACT
CTAGTTGAAC CATGTATGTT TATGACCAGC GGTTTCCCTT CTATTGGTCA ATTTTCTGCC
ATGCTTGATG GCGGTTGGAA AAAGTGGAAT TGGTAG
 
Protein sequence
MSANLVTSAW GYIGKMPAKG DFVKDGLSQD FSERWHDWQQ AVIAVSREQL GESWNEHFLT 
APVWHFALDV SYLEDSTYIG SMIPSVDACG RYFFFTIARA VKGEAAQYWG DKAWTEDSAS
LALAVLEDDF VFDVWHKSMQ EKNDLVANVK SEVRPLKFLY QSQISTIFHD QGGADQSALL
NYLIKEKLSK PCFWWTEGST LVEPCMFMTS GFPSIGQFSA MLDGGWKKWN W