Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000013 |
Symbol | |
ID | 8558311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 10374 |
End bp | 10829 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 646407671 |
Product | type VI secretion lipoprotein/VasD |
Protein accession | YP_003287165 |
Protein GI | 262395312 |
COG category | [S] Function unknown |
COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAG TTTATCAGTA CATTTTGTTA TTAATTTCAA TGGTTTTATT TGGATGCTCA GCAGCCAATT TAGTTGTTGA CCCATATTCA GATTTAGAAA TAACAGCAAA TCACAATATT AACCCTGACT CCAATGGTAG GCCATCCCCT GTAGTCGTGT ATGTTTTTGA ATTAACATCA AATACCCTTT TTGAAAGTCA GGATTTTTTT TCAATTTATG AAGAAAGTGA AAAAGTCTTA GGCCCTGATT TAGTGAATAA ATATGAAATA TCATTAACTC CAGGTCAGAA AGAAACATAT CAGGCAAGTA TGTCTCCAAA GACTGAATAC TTAGGCATTG TCGCAGCGTT TCGAGATATT GAAAATTCAA ATTGGCGACA AGTCATTGAA GTGGATAAGA CCGGTTACAA CACCTATCAA ATTCTGTTAG AAGATCTGTC TTTGGTCGTA AAATAA
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Protein sequence | MKRVYQYILL LISMVLFGCS AANLVVDPYS DLEITANHNI NPDSNGRPSP VVVYVFELTS NTLFESQDFF SIYEESEKVL GPDLVNKYEI SLTPGQKETY QASMSPKTEY LGIVAAFRDI ENSNWRQVIE VDKTGYNTYQ ILLEDLSLVV K
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