Gene VEA_000013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000013 
Symbol 
ID8558311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp10374 
End bp10829 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content34% 
IMG OID646407671 
Producttype VI secretion lipoprotein/VasD 
Protein accessionYP_003287165 
Protein GI262395312 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAG TTTATCAGTA CATTTTGTTA TTAATTTCAA TGGTTTTATT TGGATGCTCA 
GCAGCCAATT TAGTTGTTGA CCCATATTCA GATTTAGAAA TAACAGCAAA TCACAATATT
AACCCTGACT CCAATGGTAG GCCATCCCCT GTAGTCGTGT ATGTTTTTGA ATTAACATCA
AATACCCTTT TTGAAAGTCA GGATTTTTTT TCAATTTATG AAGAAAGTGA AAAAGTCTTA
GGCCCTGATT TAGTGAATAA ATATGAAATA TCATTAACTC CAGGTCAGAA AGAAACATAT
CAGGCAAGTA TGTCTCCAAA GACTGAATAC TTAGGCATTG TCGCAGCGTT TCGAGATATT
GAAAATTCAA ATTGGCGACA AGTCATTGAA GTGGATAAGA CCGGTTACAA CACCTATCAA
ATTCTGTTAG AAGATCTGTC TTTGGTCGTA AAATAA
 
Protein sequence
MKRVYQYILL LISMVLFGCS AANLVVDPYS DLEITANHNI NPDSNGRPSP VVVYVFELTS 
NTLFESQDFF SIYEESEKVL GPDLVNKYEI SLTPGQKETY QASMSPKTEY LGIVAAFRDI
ENSNWRQVIE VDKTGYNTYQ ILLEDLSLVV K