| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000012 |
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| Symbol | |
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| ID | 8558310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 9169 |
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| End bp | 10362 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646407670 |
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| Product | uncharacterized protein ImpI/VasC |
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| Protein accession | YP_003287164 |
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| Protein GI | 262395311 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
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| TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTGG TTTTAACCAT AACAAGTTTT CACAAATTTA CTCCAGAGAT TGAGAGTGAG
TTTGTGTTTG AATCAAGTGA TGAGCATGCC AAAGTTACGT TTGGTCGGTC TGAGCAATGT
GATTGGACAC TGCCAGACCC TGAAAGAGTA GTATCCGGAA CTCACGGAGA GCTCATCAAG
TTTGGTGATA AATACTTGAT AAAAGACTTA TCAACTAATG GCACGTTTGT TAATAACGCT
GTGACACCTG TGGGCCAAGG AAATGAGATT GCACTAAGTG ACGACGATAC GGTTAGTTTA
GGGGATTACC AAATTTCAGT AAGTATTCAA ACGAGCACTG AGGCATTCAA TAATCAGGAA
AGTAACTTTC GTTCCAGTTC AGAACCTGAA GCATTCTCGA GTTCATCTGA AGCAGAGTTT
GTAGACCTCG GCCTTAGTGC CAGTGAGCTT TTGAATGAGA GTGTTCCTTC GGACTTTCAA
CTAGATATTG GCTTAGTCGA TGATTTTATT GATATCCCCA AACCAGAAAA ACAGAGTGTA
GATCCTACAC CTGTACCGGA AACCCCACGA CAGCTAGAAC GTCAATCAAC TCCCAAATTT
GATAGTAAAG GGAGCGAGCT TGCGGCGTTC ATTAAAGGGG CGGGTATTGA TCCAACGATG
ATTCCCAGCG ATAACAGAGA GCAATGGTTT GAACAACTGG GGGAATCATT TTCTTTGATG
TTAGTTGGTT TAATGGAAAC GCTGCACAAT CGAGCGGTAT TTAAACAAAC AAATCGACTA
AGTCATACTG CGTTTCGGAA GTCAGAAAAT AATCCTCTGA AGTTCTCTGC GAATTTAGAA
GATGCAATTC ATAACTTATA TAACCGTCAA ACTGCAAGTT TCCTAAAACC AAGTGCAGCC
ATTAAAGAAG CGTTTAGTGA TATAGAAAAT CATGAACAAG CGTTAATGAA AGGTGTTGAG
GGTACGGTTT CAAGTGTTAT GTCGCTTGTT GAGCCTACGT CGATATACTC AGAAGCTTTA
GCTAAAGACA CGGTTATTAA TAAGGTTATT CCAGCAAGAA AATATGCTCA AAGTTGGAAG
CGGTTTGAGG ATATTCATGA AAAGCTATCC GATGACATTA TCAATAAAGA ATCTCCATTT
TATTTAGAAG ATTTCGCTAA ACACTATGAG TTAGCATTAA AAAATAAAAG CTAG
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| Protein sequence | MKLVLTITSF HKFTPEIESE FVFESSDEHA KVTFGRSEQC DWTLPDPERV VSGTHGELIK
FGDKYLIKDL STNGTFVNNA VTPVGQGNEI ALSDDDTVSL GDYQISVSIQ TSTEAFNNQE
SNFRSSSEPE AFSSSSEAEF VDLGLSASEL LNESVPSDFQ LDIGLVDDFI DIPKPEKQSV
DPTPVPETPR QLERQSTPKF DSKGSELAAF IKGAGIDPTM IPSDNREQWF EQLGESFSLM
LVGLMETLHN RAVFKQTNRL SHTAFRKSEN NPLKFSANLE DAIHNLYNRQ TASFLKPSAA
IKEAFSDIEN HEQALMKGVE GTVSSVMSLV EPTSIYSEAL AKDTVINKVI PARKYAQSWK
RFEDIHEKLS DDIINKESPF YLEDFAKHYE LALKNKS
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