Gene VEA_000012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000012 
Symbol 
ID8558310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp9169 
End bp10362 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content40% 
IMG OID646407670 
Productuncharacterized protein ImpI/VasC 
Protein accessionYP_003287164 
Protein GI262395311 
COG category[T] Signal transduction mechanisms 
COG ID[COG3456] Uncharacterized conserved protein, contains FHA domain 
TIGRFAM ID[TIGR03354] type VI secretion system FHA domain protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTGG TTTTAACCAT AACAAGTTTT CACAAATTTA CTCCAGAGAT TGAGAGTGAG 
TTTGTGTTTG AATCAAGTGA TGAGCATGCC AAAGTTACGT TTGGTCGGTC TGAGCAATGT
GATTGGACAC TGCCAGACCC TGAAAGAGTA GTATCCGGAA CTCACGGAGA GCTCATCAAG
TTTGGTGATA AATACTTGAT AAAAGACTTA TCAACTAATG GCACGTTTGT TAATAACGCT
GTGACACCTG TGGGCCAAGG AAATGAGATT GCACTAAGTG ACGACGATAC GGTTAGTTTA
GGGGATTACC AAATTTCAGT AAGTATTCAA ACGAGCACTG AGGCATTCAA TAATCAGGAA
AGTAACTTTC GTTCCAGTTC AGAACCTGAA GCATTCTCGA GTTCATCTGA AGCAGAGTTT
GTAGACCTCG GCCTTAGTGC CAGTGAGCTT TTGAATGAGA GTGTTCCTTC GGACTTTCAA
CTAGATATTG GCTTAGTCGA TGATTTTATT GATATCCCCA AACCAGAAAA ACAGAGTGTA
GATCCTACAC CTGTACCGGA AACCCCACGA CAGCTAGAAC GTCAATCAAC TCCCAAATTT
GATAGTAAAG GGAGCGAGCT TGCGGCGTTC ATTAAAGGGG CGGGTATTGA TCCAACGATG
ATTCCCAGCG ATAACAGAGA GCAATGGTTT GAACAACTGG GGGAATCATT TTCTTTGATG
TTAGTTGGTT TAATGGAAAC GCTGCACAAT CGAGCGGTAT TTAAACAAAC AAATCGACTA
AGTCATACTG CGTTTCGGAA GTCAGAAAAT AATCCTCTGA AGTTCTCTGC GAATTTAGAA
GATGCAATTC ATAACTTATA TAACCGTCAA ACTGCAAGTT TCCTAAAACC AAGTGCAGCC
ATTAAAGAAG CGTTTAGTGA TATAGAAAAT CATGAACAAG CGTTAATGAA AGGTGTTGAG
GGTACGGTTT CAAGTGTTAT GTCGCTTGTT GAGCCTACGT CGATATACTC AGAAGCTTTA
GCTAAAGACA CGGTTATTAA TAAGGTTATT CCAGCAAGAA AATATGCTCA AAGTTGGAAG
CGGTTTGAGG ATATTCATGA AAAGCTATCC GATGACATTA TCAATAAAGA ATCTCCATTT
TATTTAGAAG ATTTCGCTAA ACACTATGAG TTAGCATTAA AAAATAAAAG CTAG
 
Protein sequence
MKLVLTITSF HKFTPEIESE FVFESSDEHA KVTFGRSEQC DWTLPDPERV VSGTHGELIK 
FGDKYLIKDL STNGTFVNNA VTPVGQGNEI ALSDDDTVSL GDYQISVSIQ TSTEAFNNQE
SNFRSSSEPE AFSSSSEAEF VDLGLSASEL LNESVPSDFQ LDIGLVDDFI DIPKPEKQSV
DPTPVPETPR QLERQSTPKF DSKGSELAAF IKGAGIDPTM IPSDNREQWF EQLGESFSLM
LVGLMETLHN RAVFKQTNRL SHTAFRKSEN NPLKFSANLE DAIHNLYNRQ TASFLKPSAA
IKEAFSDIEN HEQALMKGVE GTVSSVMSLV EPTSIYSEAL AKDTVINKVI PARKYAQSWK
RFEDIHEKLS DDIINKESPF YLEDFAKHYE LALKNKS