Gene VEA_004519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004519 
Symbol 
ID8558287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp3244970 
End bp3245776 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content47% 
IMG OID646407648 
Product3',5'-cyclic-nucleotide phosphodiesterase 
Protein accessionYP_003287142 
Protein GI262395288 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.16665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAATCAT CTAGTGACAG CATCAAACTT TTACAAATTA CGGATACTCA TCTGTTTGCT 
GCCGATGAGG GAAGTTTGCT GAGCGTAAAA ACGGCCGATA GCTTTAACGC TGTTGTTGCT
GATGTTTTAC GCCGCAACGT GACGTTTGAT TACATCTTGG CGACAGGGGA CATTTCCCAA
GACCATAGTG CAGAATCTTA CCAGCGCTTT GCCGAAGGCA TTGAACCGCT AGAGAAAGAC
TGCTTTTGGT TGCCTGGTAA TCATGACTAC AAGCCCAATA TGGGCAGTGT ATTACCTTCG
CAACAAATCA AAGCGGCAGA GCATGTATTG CTTGGCGCGC ATTGGCAGTT GGTTCTTTTA
GACTCGCAAG TTGTTGGCGT TCCCCACGGA CGCTTGAGTG ATCAGCAGTT AGCGTTACTC
GAAGAAAAGT TAGCAGAACA CCCAGAAAGG CACACACTTG TGTTGCTGCA TCACCATCCA
TTATTAGTGG GAAGCGCGTG GCTTGATCAA CATACCTTAA AAGATGCCGA AGCGTTCTGG
CAGGTTGTCG ATCGTTTTGA TAACGTGAAA GGCATTCTCT GTGGACATGT TCATCAAGAC
ATGAATGTGC TTCATAATGG TATTCGAGTG ATGGCAACAC CCTCGACGTG TGTTCAGTTT
AAGCCTAACT CGGATGATTT TGCCCTCGAT ACGACTTCGC CTGGTTGGCG TGAACTGCAG
CTGCATGCTT GTGGTGATAT TACGACTGAA GTGGGCCGAC TTCCTGATGG CCAGTTCCAA
CCAGACTTCT CTTCTAACGG ATACTAA
 
Protein sequence
MQSSSDSIKL LQITDTHLFA ADEGSLLSVK TADSFNAVVA DVLRRNVTFD YILATGDISQ 
DHSAESYQRF AEGIEPLEKD CFWLPGNHDY KPNMGSVLPS QQIKAAEHVL LGAHWQLVLL
DSQVVGVPHG RLSDQQLALL EEKLAEHPER HTLVLLHHHP LLVGSAWLDQ HTLKDAEAFW
QVVDRFDNVK GILCGHVHQD MNVLHNGIRV MATPSTCVQF KPNSDDFALD TTSPGWRELQ
LHACGDITTE VGRLPDGQFQ PDFSSNGY