| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004517 |
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| Symbol | |
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| ID | 8558285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3242208 |
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| End bp | 3243869 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646407646 |
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| Product | topoisomerase IV subunit B |
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| Protein accession | YP_003287140 |
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| Protein GI | 262395286 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTTG ATATCCACCC AGAAGAGAAA GTGTCAGGCG TAGAGTTAAT CCTATGCAAG
CTGCACGCAG GTGGTAAGTT CTCTAACAAA AACTACCAAT TCTCTGGTGG TTTGCACGGG
GTAGGTATTT CGGTAGTAAA CGCGTTGTCA AAACGCGTTG AAGTAACCGT TCGTCGTGAT
GGTCAAGTGT ATGAAATTGC ATTTGAGCAC GGTGATAAAG TCTCTGACCT GACCGTAACC
GGCACGTGTG GTCGTCGCAA TCGCGGTACC AGCGTGCATT TCTGGCCTGA TGCGAAGTAC
TTCGATTCGG CGAACTTCTC TGTTACGCGC CTAGTCAATA ATCTGCGCGC AAAAGCGGTT
TTGTGTCCGG GTTTAGAAAT TACATTAACC GACAAAGTTA ATGGTAAAGA CTATAAGTGG
TACTACGAAG ACGGTCTTAA AGACTATCTT GCGGAAGGCG TAAAAGGCTA CCCAGTTATT
CCTGAAGAAC CATTTACTGG TGAGTTCTTG GCGGATACCG AAGCGGCAAA CTGGGCGGTA
ATTTGGCAGC CAGAAGGTGG TGAGATGATC ACCGAAAGCT ACGTTAACCT GATCCCAACC
GCTCAAGGTG GTACGCACGT TAATGGTCTA CGCCAAGGCT TGTTAGAAGC GATGCGCGAA
TTCTGTGAGT TCCGTAATCT ATTACCTCGT GGCGTGAAGC TAACGGGTGA TGACGTTTTC
GACCGCTGTT CTTACGTGTT GTCGGTTAAA ATTCAAGACC CGCAATTTGC AGGCCAGACC
AAAGAACGTC TGTCCTCTCG TCAAACCGCG GCATTTGTCT CTGGCGTAGT AAAAGATGCG
TTCAGTCTTT GGTTGAACGA AAAGCCTCAG CTAGCAGAGC AATTGGCAGA AGTCTGTATC
GCTAACGCGC ACCGTCGTAT GCGTGCAGCG AAAAAAGTCG TACGTAAGAA AGTGGCGTCC
GGCCCGGCAC TGCCAGGCAA GTTGACCGAC TGTTCAGCAC AGGACTTAAG TCGCACTGAA
ATCTTCTTTG TGGAGGGTGA CTCTGCGGGT GGCTCGGCAA AACAGGCACG TGACCGTGAA
TTCCAAGCCG TGATGCCACT GCGTGGTAAG ATCTTGAACA CGTGGGAAGT CTCTGCCGAT
CAAGTTCTTG CGTCTCAAGA AGTACACGAT ATTTCAGTGG CCTTGGGGAT TGATCCTGAC
AGCGATAACC TTGAGGGGTT GCGCTACGGT AAGATCTGTA TCCTTGCCGA TGCGGACTCG
GATGGTCTTC ACATCGCAAC GCTGCTTTGT GCACTGTTCA CTCGTCACTT CCGTGCACTG
GTTGAAGCGG GTCATATCTA TGTGGCGATG CCGCCTCTGT ATCGAATCGA CTGTGGTAAA
GAAGTGTTTT ACGCCCTCGA TGACGATGAA AAAGATGGCA TCTTAGAGCG CTTGTCGAAG
AAGAAAGCAA AAATCAACGT GCAACGATTC AAAGGTCTGG GTGAGATGAA CCCACTTCAG
TTGCGTGAAA CCACCATGGA TCCGAACACG CGTCGCTTAG TGCAGCTAAC CATTGACGAC
TCTACGGCGA CCATGGAAAT GATGGACATG CTGCTGGGCA AAAAGCGTGC AGATGACCGT
CGTTCTTGGC TACAAAACAA CGGCGACTTG GCAGAGGTGT AA
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| Protein sequence | MPVDIHPEEK VSGVELILCK LHAGGKFSNK NYQFSGGLHG VGISVVNALS KRVEVTVRRD
GQVYEIAFEH GDKVSDLTVT GTCGRRNRGT SVHFWPDAKY FDSANFSVTR LVNNLRAKAV
LCPGLEITLT DKVNGKDYKW YYEDGLKDYL AEGVKGYPVI PEEPFTGEFL ADTEAANWAV
IWQPEGGEMI TESYVNLIPT AQGGTHVNGL RQGLLEAMRE FCEFRNLLPR GVKLTGDDVF
DRCSYVLSVK IQDPQFAGQT KERLSSRQTA AFVSGVVKDA FSLWLNEKPQ LAEQLAEVCI
ANAHRRMRAA KKVVRKKVAS GPALPGKLTD CSAQDLSRTE IFFVEGDSAG GSAKQARDRE
FQAVMPLRGK ILNTWEVSAD QVLASQEVHD ISVALGIDPD SDNLEGLRYG KICILADADS
DGLHIATLLC ALFTRHFRAL VEAGHIYVAM PPLYRIDCGK EVFYALDDDE KDGILERLSK
KKAKINVQRF KGLGEMNPLQ LRETTMDPNT RRLVQLTIDD STATMEMMDM LLGKKRADDR
RSWLQNNGDL AEV
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