| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004516 |
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| Symbol | |
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| ID | 8558284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3239919 |
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| End bp | 3242204 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646407645 |
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| Product | topoisomerase IV subunit A |
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| Protein accession | YP_003287139 |
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| Protein GI | 262395285 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACAG AAATTACCTA CGATGGCGTC GAACAGTTGC CAATGCGCAA GTTCACTGAA
GACGCTTATC TGAACTACTC GATGTACGTC ATCATGGACC GCGCCTTGCC ATACATTGGT
GATGGCTTAA AGCCGGTTCA ACGACGCATC ATTTATGCGA TGTCAGAGCT TGGTCTCTCC
GCATCAGCAA AATACAAAAA ATCTGCACGT ACCGTTGGTG ACGTGTTAGG TAAATACCAT
CCGCACGGTG ATTCAGCGTG TTACGAAGCG ATGGTATTGA TGGCTCAGCC ATTCTCTTAC
CGCTATCCAT TAGTGGATGG TCAAGGTAAC TGGGGTGCGC CAGATGACCC GAAATCATTT
GCGGCAATGC GTTATACCGA AGCAAAACTG TCTAAGTTTG CTGAAGTATT GCTAGGCGAA
CTGGGCCAGG GCACGGTTGA ATGGCAACCT AACTTTGATG GCACAATGAA AGAGCCACAA
ATGTTGCCAG CACGTCTGCC TCATATCTTG CTTAACGGTG TAACCGGTAT TGCGGTTGGT
ATGGCAACAG ACATCCCACC GCATAACGTT CGTGAAATCG CAGATGCGAC TATTCATTTG
ATCGACAACC CGAAAGCAGA ACTGCCGGAC GTGATGCAAT ATGTTAAAGG TCCGGATTAC
CCAACAGAAG CAGAAATCAT CTCGCCGCAA GCGGATATTG AGAAGATTTA CCGCAATGGT
CGCGGCAGCA TCAAGATGCG CGCGGTATGG CACAAAGAAG GTTCTGATAT CGTTATCACC
TCTCTGCCAC ACCAAGTATC GGGTGCAAAA CTGCTTGAGC AAATCGCCAA CCAGATGCGT
GCGAAGAAGC TACCAATGGT TGACGATCTT CGTGACGAGT CGGATCACGA GAACCCAACG
CGTATCGTTG TGGTACCTAA GTCAAACCGC GTCGATTGTG ATTTGTTGAT GAACCACTTG
TTCGCATCAA CGGATCTTGA GCGCAGCTAC CGCGTTAACT TGAACATGAT TGGTTTGGAT
AATCGTCCTC AAGTTAAAGG TCTGGTGCAA ATTCTGTCAG AGTGGATTGA GTTCCGTCGC
ACGACCGTAC GTCGTCGTCT ACAACACCGC CTAGACAAAG TCATGGCTCG CTTACACATT
TTGGAAGGTT TGTTGGTTGC TTACCTAAAC CTAGATGAAG TGATTGAGAT CATCCGTACC
GAAGATGATC CTAAAGCGGT ATTGATGGCA CGCTTCGGTA TTACCGATAT CCAAGCGGAT
GCGATTCTAG ACACCAAACT TCGTCATCTA GCCAAGCTAG AAGAGATGAA GATTCGTGGT
GAGCAAGACG AGCTAGAGAA AGAGCGCGAG AAGCTAGAAC AGCTACTCGG TTCTGAGCGC
CGTCTAAACA CACTACTGAA AAAAGAAATT AAAGCAGACG CAGAGAAATA CGGTGATGAC
CGTCGATCTC CATTGGTTGA GCGTGCAGAG GCAAAAGCGC TCACTGAACG TGATCTTGTT
CCAAGTGAAC CAATCACGGT TGTGCTTTCT GAGAAAGGTT GGATTCGTCA CGCGAAAGGC
CATGACGTAG ATGCAGAAGG CCTGAACTAT AAGTCGGGTG ATAAATACTT AGCGCACGCG
CGAGGTAAGA GTAATCAGCC TGCGGTATTC CTAGGTAGTG ACGGTCGAAG TTACTCTCTG
GAATCGCACT CGCTGCCTTC TGCTCGTAGT CAAGGTGAGC CGATTACCGG TCGTTTGAAT
ATTACGGCTG GTAGCAGTAT TCGCCAAGTG ATCATGAGTG AAGAAGATCA GCTGTGGCTG
GTGGGCTCTG ATGCAGGTTA CGGCTTTGTA TGTAAAGGCG CTGACTTGCT GTCTAAAAAC
CGCAGTGGTA AAGCGCTGGT CACTTTGCCG GCTAACTCTG AGGTCATGAC GCCAAAAGCG
ATTGAAGATT TAGATTCTGA TGAAATCTTA GCAATCACTA ACCAAGGTCG CATGCTGCTG
TTCCCAATCA AAGACCTGCC ACAACTGGCG AAAGGTAAAG GGAATAAGAT CATCAATATT
CCTGCTGCTA AAGCAAAAGA GCGAGAAGAA GTACTATCTC ACTTAATGTC TTTACCAAAA
GGTGCATCGT TAACGCTGTA CGCGGGTAAG CGAAAGTTGG GTCTTAAACC GTCTGACCTT
GATAACTTCC GTGGCGAACG TGGTCGCCGA GGTGGGTTAT TACCAAGAGG TTTGCAGCGA
GTCACTCGCA TTGAAGTTGA GCTGGATGAT TCCGATACGA CGGAAGCACC GAGCGATAGC
GAGTAA
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| Protein sequence | MSTEITYDGV EQLPMRKFTE DAYLNYSMYV IMDRALPYIG DGLKPVQRRI IYAMSELGLS
ASAKYKKSAR TVGDVLGKYH PHGDSACYEA MVLMAQPFSY RYPLVDGQGN WGAPDDPKSF
AAMRYTEAKL SKFAEVLLGE LGQGTVEWQP NFDGTMKEPQ MLPARLPHIL LNGVTGIAVG
MATDIPPHNV REIADATIHL IDNPKAELPD VMQYVKGPDY PTEAEIISPQ ADIEKIYRNG
RGSIKMRAVW HKEGSDIVIT SLPHQVSGAK LLEQIANQMR AKKLPMVDDL RDESDHENPT
RIVVVPKSNR VDCDLLMNHL FASTDLERSY RVNLNMIGLD NRPQVKGLVQ ILSEWIEFRR
TTVRRRLQHR LDKVMARLHI LEGLLVAYLN LDEVIEIIRT EDDPKAVLMA RFGITDIQAD
AILDTKLRHL AKLEEMKIRG EQDELEKERE KLEQLLGSER RLNTLLKKEI KADAEKYGDD
RRSPLVERAE AKALTERDLV PSEPITVVLS EKGWIRHAKG HDVDAEGLNY KSGDKYLAHA
RGKSNQPAVF LGSDGRSYSL ESHSLPSARS QGEPITGRLN ITAGSSIRQV IMSEEDQLWL
VGSDAGYGFV CKGADLLSKN RSGKALVTLP ANSEVMTPKA IEDLDSDEIL AITNQGRMLL
FPIKDLPQLA KGKGNKIINI PAAKAKEREE VLSHLMSLPK GASLTLYAGK RKLGLKPSDL
DNFRGERGRR GGLLPRGLQR VTRIEVELDD SDTTEAPSDS E
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